Variant report

Variant	rs59180193
Chromosome Location	chr11:59670536-59670537
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs58599361	0.95[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs59287057	0.98[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs61678206	0.94[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs73490959	0.97[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs73490967	0.94[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs73490968	0.94[AFR][1000 genomes];0.83[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv334	chr11:59663800-59709104	ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv1045477	chr11:59664372-59714143	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:59670400-59670600	Enhancers	K562	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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