The 2.0 version of rSNPBase

Variant report

Variant rs59319848
Chromosome Location chr1:215797128-215797129
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:215741800-215809800 Weak transcription Colonic Mucosa Colon
2 chr1:215750000-215805000 Weak transcription Lung lung
3 chr1:215750200-215804400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr1:215750200-215809200 Weak transcription Gastric stomach
5 chr1:215755800-215804800 Weak transcription ES-WA7 Cell Line embryonic stem cell
6 chr1:215773800-215798600 Weak transcription ES-I3 Cell Line embryonic stem cell
7 chr1:215779400-215799200 Weak transcription Psoas Muscle Psoas
8 chr1:215781000-215797200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
9 chr1:215781200-215797400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr1:215782200-215799400 Weak transcription Fetal Heart heart
11 chr1:215782800-215797200 Weak transcription Dnd41 blood
12 chr1:215783000-215798800 Weak transcription Brain Inferior Temporal Lobe brain
13 chr1:215786600-215809400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr1:215786800-215797400 Weak transcription Fetal Brain Female brain
15 chr1:215786800-215798200 Weak transcription Brain Cingulate Gyrus brain
16 chr1:215786800-215799000 Weak transcription Small Intestine intestine
17 chr1:215786800-215801000 Weak transcription H9 Cell Line embryonic stem cell
18 chr1:215787200-215798400 Weak transcription Primary T cells from cord blood blood
19 chr1:215787200-215800600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr1:215787200-215810200 Weak transcription Pancreatic Islets Pancreatic Islet
21 chr1:215787600-215801800 Weak transcription Skeletal Muscle Male skeletal muscle
22 chr1:215789000-215799200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr1:215789200-215797400 Strong transcription Breast Myoepithelial Primary Cells Breast
24 chr1:215790200-215797600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr1:215791000-215804400 Weak transcription Esophagus oesophagus
26 chr1:215791000-215805000 Weak transcription Fetal Intestine Small intestine
27 chr1:215791600-215797400 Strong transcription Fetal Kidney kidney
28 chr1:215791600-215798000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr1:215791600-215799400 Weak transcription Right Ventricle heart
30 chr1:215791800-215797600 Strong transcription Osteobl bone
31 chr1:215792200-215800000 Strong transcription Liver Liver
32 chr1:215792400-215810200 Weak transcription Aorta Aorta
33 chr1:215792600-215798800 Weak transcription Brain Substantia Nigra brain
34 chr1:215792600-215801800 Weak transcription Fetal Stomach stomach
35 chr1:215792600-215802800 Weak transcription Fetal Brain Male brain
36 chr1:215792600-215804400 Weak transcription NHEK skin
37 chr1:215792600-215809800 Weak transcription Pancreas Pancrea
38 chr1:215793600-215804400 Weak transcription Cortex derived primary cultured neurospheres brain
39 chr1:215793800-215798200 Weak transcription Fetal Thymus thymus
40 chr1:215794200-215798400 Weak transcription Brain Anterior Caudate brain
41 chr1:215794400-215797800 Weak transcription Brain Angular Gyrus brain
42 chr1:215794400-215798200 Weak transcription HUVEC blood vessel
43 chr1:215794400-215798800 Weak transcription Ovary ovary
44 chr1:215794400-215801200 Weak transcription K562 blood
45 chr1:215794400-215802200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
46 chr1:215794400-215804200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr1:215794400-215804600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
48 chr1:215794400-215804600 Weak transcription HMEC breast
49 chr1:215794400-215810000 Weak transcription Sigmoid Colon Sigmoid Colon
50 chr1:215794600-215798000 Weak transcription Skeletal Muscle Female skeletal muscle

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Last update: Aug 31, 2015