Variant report
| Variant | rs59374151 |
|---|---|
| Chromosome Location | chr10:52982590-52982591 |
| allele | A/T |
| Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| rs_ID | r2[population] |
|---|---|
| rs10490977 | 0.89[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs10996353 | 0.89[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs12257648 | 0.89[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs16914938 | 1.00[ASN][1000 genomes] |
| rs16914978 | 1.00[ASN][1000 genomes] |
| rs16914985 | 1.00[ASN][1000 genomes] |
| rs16915184 | 1.00[ASN][1000 genomes] |
| rs16915908 | 0.89[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs1904674 | 1.00[ASN][1000 genomes] |
| rs1904680 | 1.00[ASN][1000 genomes] |
| rs1904684 | 1.00[ASN][1000 genomes] |
| rs1904685 | 1.00[ASN][1000 genomes] |
| rs1904686 | 1.00[ASN][1000 genomes] |
| rs41403246 | 1.00[ASN][1000 genomes] |
| rs55713575 | 1.00[ASN][1000 genomes] |
| rs55806342 | 1.00[ASN][1000 genomes] |
| rs55847608 | 1.00[ASN][1000 genomes] |
| rs56142495 | 1.00[ASN][1000 genomes] |
| rs56408019 | 1.00[ASN][1000 genomes] |
| rs56822959 | 1.00[ASN][1000 genomes] |
| rs59014714 | 1.00[ASN][1000 genomes] |
| rs59140787 | 1.00[ASN][1000 genomes] |
| rs59686966 | 1.00[ASN][1000 genomes] |
| rs60646280 | 1.00[ASN][1000 genomes] |
| rs60965856 | 1.00[ASN][1000 genomes] |
| rs7075809 | 1.00[ASN][1000 genomes] |
| rs7092050 | 1.00[ASN][1000 genomes] |
| rs7093618 | 1.00[ASN][1000 genomes] |
| rs7094064 | 1.00[ASN][1000 genomes] |
| rs7100315 | 1.00[ASN][1000 genomes] |
| rs73338462 | 1.00[ASN][1000 genomes] |
| rs74131784 | 1.00[ASN][1000 genomes] |
| rs74131787 | 1.00[ASN][1000 genomes] |
| rs74131799 | 1.00[ASN][1000 genomes] |
| rs74131800 | 1.00[ASN][1000 genomes] |
| rs74133506 | 1.00[ASN][1000 genomes] |
| rs74133508 | 1.00[ASN][1000 genomes] |
| rs74133509 | 1.00[ASN][1000 genomes] |
| rs74133510 | 1.00[ASN][1000 genomes] |
| rs74133511 | 1.00[ASN][1000 genomes] |
| rs74133512 | 1.00[ASN][1000 genomes] |
| rs74133514 | 1.00[ASN][1000 genomes] |
| rs74133517 | 1.00[ASN][1000 genomes] |
| rs74133521 | 1.00[ASN][1000 genomes] |
| rs74133522 | 1.00[ASN][1000 genomes] |
| rs74133523 | 1.00[ASN][1000 genomes] |
| rs74133525 | 1.00[ASN][1000 genomes] |
| rs74133529 | 1.00[ASN][1000 genomes] |
| rs74133530 | 1.00[ASN][1000 genomes] |
| rs74133531 | 1.00[ASN][1000 genomes] |
| rs74133532 | 1.00[ASN][1000 genomes] |
| rs74133533 | 1.00[ASN][1000 genomes] |
| rs74133534 | 1.00[ASN][1000 genomes] |
| rs74133535 | 1.00[ASN][1000 genomes] |
| rs74133537 | 1.00[ASN][1000 genomes] |
| rs7907338 | 1.00[ASN][1000 genomes] |
| rs7913794 | 1.00[ASN][1000 genomes] |
| rs7915033 | 1.00[ASN][1000 genomes] |
| rs7917209 | 1.00[ASN][1000 genomes] |
| rs7917357 | 1.00[ASN][1000 genomes] |
| rs9299471 | 1.00[ASN][1000 genomes] |
| rs9414837 | 1.00[ASN][1000 genomes] |
| rs9414843 | 1.00[ASN][1000 genomes] |
| rs9414845 | 1.00[ASN][1000 genomes] |
| rs9414846 | 1.00[ASN][1000 genomes] |
| rs9414847 | 1.00[ASN][1000 genomes] |
| rs9414850 | 1.00[ASN][1000 genomes] |
| rs9414851 | 1.00[ASN][1000 genomes] |
| rs9414852 | 1.00[ASN][1000 genomes] |
| rs9414853 | 1.00[ASN][1000 genomes] |
| rs9414855 | 1.00[ASN][1000 genomes] |
| rs9414856 | 1.00[ASN][1000 genomes] |
| rs9414857 | 1.00[ASN][1000 genomes] |
| rs9414858 | 1.00[ASN][1000 genomes] |
| rs9414859 | 1.00[ASN][1000 genomes] |
| rs9414860 | 1.00[ASN][1000 genomes] |
| rs9414861 | 1.00[ASN][1000 genomes] |
| rs9414863 | 1.00[ASN][1000 genomes] |
| rs9414864 | 1.00[ASN][1000 genomes] |
| rs9414865 | 1.00[ASN][1000 genomes] |
| rs9415735 | 1.00[ASN][1000 genomes] |
| rs9415743 | 1.00[ASN][1000 genomes] |
| rs9415747 | 1.00[ASN][1000 genomes] |
| rs9415758 | 1.00[ASN][1000 genomes] |
| rs9415759 | 1.00[ASN][1000 genomes] |
| rs9415760 | 1.00[ASN][1000 genomes] |
| rs9415761 | 1.00[ASN][1000 genomes] |
| rs9415764 | 1.00[ASN][1000 genomes] |
| rs9415765 | 1.00[ASN][1000 genomes] |
| rs9415766 | 1.00[ASN][1000 genomes] |
| rs9415768 | 1.00[ASN][1000 genomes] |
| rs9415769 | 1.00[ASN][1000 genomes] |
| rs9415771 | 1.00[ASN][1000 genomes] |
| rs9415772 | 1.00[ASN][1000 genomes] |
| rs9415773 | 1.00[ASN][1000 genomes] |
| rs9415774 | 1.00[ASN][1000 genomes] |
| rs9415775 | 1.00[ASN][1000 genomes] |
| rs9415776 | 1.00[ASN][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv1036645 | chr10:52804961-53159076 | Enhancers Bivalent/Poised TSS Bivalent Enhancer Weak transcription Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Strong transcription ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 22 gene(s) | inside rSNPs | diseases |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr10:52976000-52984000 | Weak transcription | Aorta | Aorta |
| 2 | chr10:52976200-52983200 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 3 | chr10:52976200-52988400 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 4 | chr10:52977400-52983600 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 5 | chr10:52978000-52983600 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 6 | chr10:52978600-52983600 | Weak transcription | NHLF | lung |
| 7 | chr10:52978800-52983600 | Weak transcription | Fetal Lung | lung |
| 8 | chr10:52978800-52983600 | Weak transcription | NHDF-Ad | bronchial |
| 9 | chr10:52980000-52983800 | Weak transcription | Fetal Muscle Leg | muscle |
| 10 | chr10:52981200-52983600 | Weak transcription | Fetal Stomach | stomach |





