The 2.0 version of rSNPBase

Variant report

Variant rs59408163
Chromosome Location chr2:11879248-11879249
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:11875200-11883000 Weak transcription H1 Cell Line embryonic stem cell
2 chr2:11877000-11882800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr2:11877000-11883400 Weak transcription Right Atrium heart
4 chr2:11878400-11879400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
5 chr2:11878400-11879600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
6 chr2:11878400-11880000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
7 chr2:11878600-11879400 Enhancers ES-WA7 Cell Line embryonic stem cell
8 chr2:11878600-11879400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr2:11878600-11879400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr2:11878600-11879400 Enhancers Primary Natural Killer cells fromperipheralblood blood
11 chr2:11878600-11879400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
12 chr2:11878600-11879400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr2:11878600-11879400 Enhancers HMEC breast
14 chr2:11878600-11879600 Enhancers Primary hematopoietic stem cells short term culture blood
15 chr2:11878600-11879600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr2:11878600-11879600 Enhancers Liver Liver
17 chr2:11878600-11879600 Enhancers Placenta Placenta
18 chr2:11878600-11879600 Enhancers A549 lung
19 chr2:11878600-11879600 Enhancers Osteobl bone
20 chr2:11878600-11879800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr2:11878600-11879800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
22 chr2:11878600-11879800 Enhancers Muscle Satellite Cultured Cells --
23 chr2:11878600-11879800 Enhancers Duodenum Smooth Muscle Duodenum
24 chr2:11878600-11879800 Enhancers Fetal Adrenal Gland Adrenal Gland
25 chr2:11878600-11879800 Enhancers Skeletal Muscle Male skeletal muscle
26 chr2:11878600-11879800 Enhancers Monocytes-CD14+_RO01746 blood
27 chr2:11878600-11879800 Enhancers NHLF lung
28 chr2:11878600-11880000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr2:11878600-11880400 Enhancers Skeletal Muscle Female skeletal muscle
30 chr2:11878800-11879400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr2:11878800-11879400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
32 chr2:11878800-11879400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr2:11878800-11879400 Enhancers Adipose Nuclei Adipose
34 chr2:11878800-11879400 Enhancers Brain Anterior Caudate brain
35 chr2:11878800-11879400 Weak transcription Colonic Mucosa Colon
36 chr2:11878800-11879400 Enhancers Esophagus oesophagus
37 chr2:11878800-11879400 Enhancers Left Ventricle heart
38 chr2:11878800-11879400 Enhancers Pancreas Pancrea
39 chr2:11878800-11879400 Flanking Active TSS HepG2 liver
40 chr2:11878800-11879600 Enhancers ES-I3 Cell Line embryonic stem cell
41 chr2:11878800-11879600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr2:11878800-11879600 Enhancers HUVEC blood vessel
43 chr2:11878800-11879600 Enhancers NHEK skin
44 chr2:11878800-11879800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr2:11878800-11879800 Enhancers NHDF-Ad bronchial
46 chr2:11878800-11882800 Weak transcription Fetal Thymus thymus
47 chr2:11879000-11879400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
48 chr2:11879000-11879600 Enhancers Primary monocytes fromperipheralblood blood
49 chr2:11879000-11879600 Enhancers NH-A brain
50 chr2:11879000-11883400 Weak transcription Primary T cells fromperipheralblood blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015