Variant report

Variant	rs59431775
Chromosome Location	chr1:211146682-211146683
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 27 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs11119635	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11119653	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11119661	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12057232	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12072849	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12080732	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12081478	0.86[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12082952	0.95[AFR][1000 genomes]
rs12084848	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12087790	0.88[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17017085	0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17017087	0.96[AFR][1000 genomes]
rs1933520	1.00[ASN][1000 genomes]
rs2062674	0.80[AFR][1000 genomes]
rs56919772	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57821233	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58216144	0.84[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59797977	0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6540646	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6671576	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73073450	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7523281	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7523925	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7531557	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7556274	0.88[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7556549	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv524740	chr1:211143108-211155614	Enhancers Strong transcription Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:211123000-211152000	Weak transcription	HSMM	muscle

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