The 2.0 version of rSNPBase

Variant report

Variant rs59444123
Chromosome Location chr1:94291544-94291545
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94279600-94302800 Weak transcription Stomach Smooth Muscle stomach
2 chr1:94283400-94310000 Weak transcription Skeletal Muscle Male skeletal muscle
3 chr1:94283600-94293400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr1:94284000-94294600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr1:94284200-94292200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr1:94284200-94306200 Weak transcription Fetal Muscle Trunk muscle
7 chr1:94284200-94311200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
8 chr1:94284400-94296000 Weak transcription Fetal Intestine Small intestine
9 chr1:94286400-94294800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr1:94286600-94295600 Enhancers Placenta Amnion Placenta Amnion
11 chr1:94287000-94292400 Weak transcription HUVEC blood vessel
12 chr1:94287400-94293600 Weak transcription iPS-18 Cell Line embryonic stem cell
13 chr1:94287600-94292600 Weak transcription Fetal Adrenal Gland Adrenal Gland
14 chr1:94287600-94292800 Weak transcription H1 Cell Line embryonic stem cell
15 chr1:94287600-94292800 Weak transcription A549 lung
16 chr1:94287600-94292800 Weak transcription HSMM muscle
17 chr1:94287600-94292800 Weak transcription HSMMtube muscle
18 chr1:94287600-94292800 Weak transcription NH-A brain
19 chr1:94287600-94293200 Weak transcription HUES64 Cell Line embryonic stem cell
20 chr1:94287600-94294000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr1:94287800-94292800 Weak transcription H9 Cell Line embryonic stem cell
22 chr1:94288200-94293200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr1:94288800-94292400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr1:94288800-94292400 Weak transcription NHDF-Ad bronchial
25 chr1:94288800-94292800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr1:94288800-94293600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
27 chr1:94289000-94292400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr1:94289000-94292800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
29 chr1:94289000-94293000 Weak transcription iPS-20b Cell Line embryonic stem cell
30 chr1:94289000-94293000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr1:94289000-94293200 Weak transcription NHEK skin
32 chr1:94289200-94292800 Weak transcription HUES6 Cell Line embryonic stem cell
33 chr1:94289600-94292000 Enhancers Cortex derived primary cultured neurospheres brain
34 chr1:94289600-94292600 Enhancers Breast Myoepithelial Primary Cells Breast
35 chr1:94290000-94296400 Enhancers Placenta Placenta
36 chr1:94290200-94311400 Weak transcription Aorta Aorta
37 chr1:94290600-94291800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
38 chr1:94290600-94292600 Weak transcription Fetal Muscle Leg muscle
39 chr1:94290600-94293200 Weak transcription HMEC breast
40 chr1:94290800-94293400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr1:94291200-94294800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr1:94291400-94291800 Enhancers ES-I3 Cell Line embryonic stem cell

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Last update: Aug 31, 2015