Variant report

Variant	rs5960060
Chromosome Location	chrX:55083018-55083019
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10521478	1.00[ASW][hapmap]
rs11091385	1.00[CEU][hapmap];0.94[JPT][hapmap]
rs12012253	0.84[CEU][hapmap]
rs12557008	1.00[CEU][hapmap];0.94[GIH][hapmap];0.94[TSI][hapmap]
rs12851962	1.00[MKK][hapmap]
rs1494365	0.84[ASW][hapmap];0.84[CEU][hapmap]
rs2005463	1.00[MKK][hapmap]
rs2281383	1.00[MKK][hapmap]
rs4295789	1.00[ASW][hapmap]
rs4826367	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs5960385	1.00[ASW][hapmap];1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap]
rs5960404	0.84[ASW][hapmap]
rs983823	0.94[CHB][hapmap];1.00[JPT][hapmap]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:55082800-55084600	Enhancers	Primary T helper naive cells fromperipheralblood	blood
2	chrX:55082800-55084600	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
3	chrX:55083000-55083400	Enhancers	Primary T cells from cord blood	blood
4	chrX:55083000-55083400	Enhancers	HUVEC	blood vessel
5	chrX:55083000-55083800	Enhancers	Primary T helper naive cells from peripheral blood	blood
6	chrX:55083000-55083800	Enhancers	Primary T helper cells PMA-I stimulated	--
7	chrX:55083000-55084200	Enhancers	Primary T cells fromperipheralblood	blood
8	chrX:55083000-55084200	Enhancers	Primary T helper cells fromperipheralblood	blood
9	chrX:55083000-55084200	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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