Variant report

Variant	rs59610853
Chromosome Location	chr13:96309244-96309245
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr13:96307904..96310179-chr13:96327912..96330273,2	MCF-7	breast:
2	chr13:96119619..96122365-chr13:96309013..96311626,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000247400	Chromatin interaction
ENSG00000102580	Chromatin interaction

rs_ID	r²[population]
rs10450822	1.00[AMR][1000 genomes]
rs17878352	1.00[AMR][1000 genomes]
rs17878370	1.00[AMR][1000 genomes]
rs17878502	1.00[AMR][1000 genomes]
rs17878514	1.00[AMR][1000 genomes]
rs17878602	1.00[AMR][1000 genomes]
rs17878616	1.00[AMR][1000 genomes]
rs17878678	1.00[AMR][1000 genomes]
rs17878939	1.00[AMR][1000 genomes]
rs17878975	1.00[AMR][1000 genomes]
rs17879029	1.00[AMR][1000 genomes]
rs17879147	1.00[AMR][1000 genomes]
rs17879500	1.00[AMR][1000 genomes]
rs17879575	1.00[AMR][1000 genomes]
rs17879910	1.00[AMR][1000 genomes]
rs17880017	1.00[AMR][1000 genomes]
rs17880330	1.00[AMR][1000 genomes]
rs17881256	1.00[AMR][1000 genomes]
rs17882010	1.00[AMR][1000 genomes]
rs17882236	1.00[AMR][1000 genomes]
rs17882407	1.00[AMR][1000 genomes]
rs17882543	1.00[AMR][1000 genomes]
rs17882766	1.00[AMR][1000 genomes]
rs17882939	1.00[AMR][1000 genomes]
rs17882979	1.00[AMR][1000 genomes]
rs17883935	1.00[AMR][1000 genomes]
rs17883970	1.00[AMR][1000 genomes]
rs17884692	1.00[AMR][1000 genomes]
rs17884748	1.00[AMR][1000 genomes]
rs17885080	1.00[AMR][1000 genomes]
rs17885095	1.00[AMR][1000 genomes]
rs17885182	1.00[AMR][1000 genomes]
rs17885200	1.00[AMR][1000 genomes]
rs17885366	1.00[AMR][1000 genomes]
rs17885409	1.00[AMR][1000 genomes]
rs17885683	1.00[AMR][1000 genomes]
rs17885953	1.00[AMR][1000 genomes]
rs17885955	1.00[AMR][1000 genomes]
rs17886087	1.00[AMR][1000 genomes]
rs17886100	1.00[AMR][1000 genomes]
rs17886542	1.00[AMR][1000 genomes]
rs2389392	1.00[AMR][1000 genomes]
rs2389393	1.00[AMR][1000 genomes]
rs3087336	1.00[AMR][1000 genomes]
rs35123499	1.00[AMR][1000 genomes]
rs3887326	1.00[AMR][1000 genomes]
rs56821033	1.00[AMR][1000 genomes]
rs57025821	1.00[AMR][1000 genomes]
rs57164385	1.00[AMR][1000 genomes]
rs57893781	1.00[AMR][1000 genomes]
rs5805947	1.00[AMR][1000 genomes]
rs58500800	1.00[AMR][1000 genomes]
rs58585173	1.00[AMR][1000 genomes]
rs58636515	1.00[AMR][1000 genomes]
rs58773135	1.00[AMR][1000 genomes]
rs58832724	1.00[AMR][1000 genomes]
rs58887467	1.00[AMR][1000 genomes]
rs58969975	1.00[AMR][1000 genomes]
rs59178254	1.00[AMR][1000 genomes]
rs59489368	1.00[AMR][1000 genomes]
rs59511172	1.00[AMR][1000 genomes]
rs59577050	1.00[AMR][1000 genomes]
rs59810714	1.00[AMR][1000 genomes]
rs59855619	1.00[AMR][1000 genomes]
rs60064299	1.00[AMR][1000 genomes]
rs60215204	1.00[AMR][1000 genomes]
rs60521785	1.00[AMR][1000 genomes]
rs61330532	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61380463	1.00[AMR][1000 genomes]
rs61559131	1.00[AMR][1000 genomes]
rs7319355	1.00[AMR][1000 genomes]
rs7328682	1.00[AMR][1000 genomes]
rs7333576	1.00[AMR][1000 genomes]
rs7337773	1.00[AMR][1000 genomes]
rs73548787	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73548796	1.00[AMR][1000 genomes]
rs73548798	1.00[AMR][1000 genomes]
rs73550505	1.00[AMR][1000 genomes]
rs73550507	1.00[AMR][1000 genomes]
rs73550511	1.00[AMR][1000 genomes]
rs73550512	1.00[AMR][1000 genomes]
rs73550513	1.00[AMR][1000 genomes]
rs73550515	1.00[AMR][1000 genomes]
rs73550518	1.00[AMR][1000 genomes]
rs73550523	1.00[AMR][1000 genomes]
rs73550529	1.00[AMR][1000 genomes]
rs73550530	1.00[AMR][1000 genomes]
rs73550533	1.00[AMR][1000 genomes]
rs73550534	1.00[AMR][1000 genomes]
rs73550539	1.00[AMR][1000 genomes]
rs73550545	1.00[AMR][1000 genomes]
rs73550547	1.00[AMR][1000 genomes]
rs73550548	1.00[AMR][1000 genomes]
rs73550551	1.00[AMR][1000 genomes]
rs73550552	1.00[AMR][1000 genomes]
rs73550554	1.00[AMR][1000 genomes]
rs73550558	1.00[AMR][1000 genomes]
rs73550559	1.00[AMR][1000 genomes]
rs73550562	1.00[AMR][1000 genomes]
rs73550567	1.00[AMR][1000 genomes]
rs73550570	1.00[AMR][1000 genomes]
rs73550573	1.00[AMR][1000 genomes]
rs73550574	1.00[AMR][1000 genomes]
rs73550576	1.00[AMR][1000 genomes]
rs73550577	1.00[AMR][1000 genomes]
rs73550580	1.00[AMR][1000 genomes]
rs73550583	1.00[AMR][1000 genomes]
rs73550584	1.00[AMR][1000 genomes]
rs73550585	1.00[AMR][1000 genomes]
rs73550587	1.00[AMR][1000 genomes]
rs73550588	1.00[AMR][1000 genomes]
rs73550589	1.00[AMR][1000 genomes]
rs73550591	1.00[AMR][1000 genomes]
rs73550593	1.00[AMR][1000 genomes]
rs73550596	1.00[AMR][1000 genomes]
rs73550598	1.00[AMR][1000 genomes]
rs73550599	1.00[AMR][1000 genomes]
rs73550602	1.00[AMR][1000 genomes]
rs73552758	1.00[AMR][1000 genomes]
rs73552763	1.00[AMR][1000 genomes]
rs73552764	1.00[AMR][1000 genomes]
rs73552765	1.00[AMR][1000 genomes]
rs73552768	1.00[AMR][1000 genomes]
rs73552772	1.00[AMR][1000 genomes]
rs73552782	1.00[AMR][1000 genomes]
rs73554904	1.00[AMR][1000 genomes]
rs73554906	1.00[AMR][1000 genomes]
rs73554917	1.00[AMR][1000 genomes]
rs73554923	1.00[AMR][1000 genomes]
rs73554937	1.00[AMR][1000 genomes]
rs73554940	1.00[AMR][1000 genomes]
rs73554949	1.00[AMR][1000 genomes]
rs73554952	1.00[AMR][1000 genomes]
rs73554955	1.00[AMR][1000 genomes]
rs73554957	1.00[AMR][1000 genomes]
rs73554961	1.00[AMR][1000 genomes]
rs73554964	1.00[AMR][1000 genomes]
rs73554998	1.00[AMR][1000 genomes]
rs73554999	1.00[AMR][1000 genomes]
rs73556703	1.00[AMR][1000 genomes]
rs73556704	1.00[AMR][1000 genomes]
rs73556705	1.00[AMR][1000 genomes]
rs73556706	1.00[AMR][1000 genomes]
rs73556707	1.00[AMR][1000 genomes]
rs73556708	1.00[AMR][1000 genomes]
rs73556710	1.00[AMR][1000 genomes]
rs73556713	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73556717	1.00[AMR][1000 genomes]
rs73556724	1.00[AMR][1000 genomes]
rs73556725	1.00[AMR][1000 genomes]
rs73556728	1.00[AMR][1000 genomes]
rs73556737	1.00[AMR][1000 genomes]
rs73556739	1.00[AMR][1000 genomes]
rs73556741	1.00[AMR][1000 genomes]
rs73556742	1.00[AMR][1000 genomes]
rs73556744	1.00[AMR][1000 genomes]
rs73556746	1.00[AMR][1000 genomes]
rs73556758	1.00[AMR][1000 genomes]
rs73556766	1.00[AMR][1000 genomes]
rs73556769	1.00[AMR][1000 genomes]
rs73556770	1.00[AMR][1000 genomes]
rs73556777	1.00[AMR][1000 genomes]
rs73556778	1.00[AMR][1000 genomes]
rs73556780	1.00[AMR][1000 genomes]
rs73556783	1.00[AMR][1000 genomes]
rs73556788	1.00[AMR][1000 genomes]
rs73556793	1.00[AMR][1000 genomes]
rs73556795	1.00[AMR][1000 genomes]
rs73556796	1.00[AMR][1000 genomes]
rs73556802	1.00[AMR][1000 genomes]
rs73558608	1.00[AMR][1000 genomes]
rs73558612	1.00[AMR][1000 genomes]
rs73558615	1.00[AMR][1000 genomes]
rs73558627	1.00[AMR][1000 genomes]
rs73558628	1.00[AMR][1000 genomes]
rs73558630	1.00[AMR][1000 genomes]
rs73558636	1.00[AMR][1000 genomes]
rs73558639	1.00[AMR][1000 genomes]
rs73558645	1.00[AMR][1000 genomes]
rs7989952	1.00[AMR][1000 genomes]
rs7991930	1.00[AMR][1000 genomes]
rs7997611	1.00[AMR][1000 genomes]
rs9671165	1.00[AMR][1000 genomes]

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv900934	chr13:96255706-96327574	Strong transcription Flanking Active TSS Bivalent/Poised TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:96308000-96309400	Enhancers	Fetal Intestine Small	intestine
2	chr13:96308400-96309400	Enhancers	Fetal Intestine Large	intestine

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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