The 2.0 version of rSNPBase

Variant report

Variant rs59629906
Chromosome Location chr14:55781189-55781190
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:90 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:55768600-55783800 Weak transcription Right Ventricle heart
2 chr14:55768800-55786400 Weak transcription Stomach Smooth Muscle stomach
3 chr14:55770800-55783800 Weak transcription Fetal Kidney kidney
4 chr14:55773600-55783000 Weak transcription Pancreas Pancrea
5 chr14:55774200-55782000 Weak transcription Fetal Lung lung
6 chr14:55775000-55783000 Weak transcription Left Ventricle heart
7 chr14:55776600-55786600 Weak transcription Fetal Brain Male brain
8 chr14:55777000-55792800 Weak transcription Brain Angular Gyrus brain
9 chr14:55777000-55795000 Weak transcription NHDF-Ad bronchial
10 chr14:55777200-55783800 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr14:55777200-55799000 Weak transcription Colon Smooth Muscle Colon
12 chr14:55777400-55782600 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
13 chr14:55777400-55795000 Weak transcription Osteobl bone
14 chr14:55777400-55799200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr14:55778000-55782600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr14:55778200-55785200 Weak transcription Small Intestine intestine
17 chr14:55778400-55782400 Weak transcription Stomach Mucosa stomach
18 chr14:55779200-55793800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
19 chr14:55779200-55798800 Weak transcription K562 blood
20 chr14:55779200-55817600 Weak transcription Hela-S3 cervix
21 chr14:55779400-55783800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr14:55779600-55782000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr14:55779600-55782200 Weak transcription Breast Myoepithelial Primary Cells Breast
24 chr14:55779600-55782400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
25 chr14:55779600-55782400 Weak transcription Aorta Aorta
26 chr14:55779600-55783000 Weak transcription Fetal Stomach stomach
27 chr14:55779600-55783600 Weak transcription Gastric stomach
28 chr14:55779600-55783800 Weak transcription Colonic Mucosa Colon
29 chr14:55779600-55784400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr14:55779600-55789200 Weak transcription HUVEC blood vessel
31 chr14:55779600-55795200 Weak transcription Fetal Adrenal Gland Adrenal Gland
32 chr14:55779600-55796800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
33 chr14:55779600-55796800 Weak transcription Ovary ovary
34 chr14:55779600-55797200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr14:55779600-55799600 Weak transcription Rectal Smooth Muscle rectum
36 chr14:55779600-55801200 Weak transcription Esophagus oesophagus
37 chr14:55779800-55781600 Weak transcription Monocytes-CD14+_RO01746 blood
38 chr14:55779800-55782000 Weak transcription Liver Liver
39 chr14:55779800-55787200 Weak transcription Placenta Placenta
40 chr14:55779800-55794400 Weak transcription HepG2 liver
41 chr14:55779800-55794800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
42 chr14:55779800-55795400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr14:55779800-55800800 Weak transcription Adipose Nuclei Adipose
44 chr14:55780000-55781600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr14:55780000-55782000 Weak transcription Primary T regulatory cells fromperipheralblood blood
46 chr14:55780000-55782200 Weak transcription Rectal Mucosa Donor 29 rectum
47 chr14:55780000-55783000 Weak transcription HSMMtube muscle
48 chr14:55780000-55797200 Weak transcription Primary T cells fromperipheralblood blood
49 chr14:55780000-55797800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
50 chr14:55780200-55782000 Weak transcription Primary T cells from cord blood blood

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Last update: Aug 31, 2015