Variant report

Variant	rs59651605
Chromosome Location	chr14:70639566-70639567
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs1122706	0.81[ASN][1000 genomes]
rs12587012	0.86[ASN][1000 genomes]
rs17107826	0.86[ASN][1000 genomes]
rs17107875	1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs17107916	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4902781	0.81[ASN][1000 genomes]
rs4902782	0.86[ASN][1000 genomes]
rs57605884	0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7142779	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7158942	0.86[ASN][1000 genomes]
rs72476792	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs8007664	0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs8020693	0.86[ASN][1000 genomes]
rs8022074	0.85[AFR][1000 genomes];0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832826	chr14:70559589-70723464	Bivalent/Poised TSS Bivalent Enhancer Enhancers Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv902075	chr14:70612618-70919016	Enhancers Strong transcription Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
3	esv3333107	chr14:70639544-70639782	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:70634000-70642800	Weak transcription	Fetal Brain Male	brain
2	chr14:70637600-70639600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr14:70637600-70641200	Enhancers	Skeletal Muscle Male	skeletal muscle
4	chr14:70638000-70640000	Weak transcription	Psoas Muscle	Psoas
5	chr14:70639400-70641600	Enhancers	Skeletal Muscle Female	skeletal muscle
6	chr14:70639400-70643200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
7	chr14:70639400-70644800	Weak transcription	Primary hematopoietic stem cells	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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