Variant report

No.	Distal block	Cell Line	Cell type
1	chr6:150863886..150866190-chr6:150885198..150886787,2	K562	blood:
2	chr6:150861044..150862970-chr6:150863595..150866527,2	MCF-7	breast:
3	chr6:150858643..150861809-chr6:150864654..150868383,3	K562	blood:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs4133114	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56115385	1.00[EUR][1000 genomes]
rs56240015	1.00[EUR][1000 genomes]
rs57832891	1.00[EUR][1000 genomes]
rs57941088	1.00[EUR][1000 genomes]
rs58095059	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58578147	1.00[EUR][1000 genomes]
rs59258256	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60016940	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73605181	1.00[EUR][1000 genomes]
rs73606254	1.00[EUR][1000 genomes]
rs73606255	1.00[EUR][1000 genomes]
rs73607031	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73607056	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73607069	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73607070	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73780022	1.00[EUR][1000 genomes]
rs73780023	1.00[EUR][1000 genomes]
rs73780024	0.81[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73780025	1.00[EUR][1000 genomes]
rs73780026	1.00[EUR][1000 genomes]
rs73780027	1.00[EUR][1000 genomes]
rs73782675	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1020067	chr6:150730783-150870708	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv886772	chr6:150743364-151024280	Enhancers Active TSS Weak transcription Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv464079	chr6:150836676-150873766	Weak transcription Enhancers ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
4	nsv604850	chr6:150836676-150873766	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:150859400-150867400	Weak transcription	Fetal Kidney	kidney
2	chr6:150863000-150867400	Weak transcription	Right Atrium	heart
3	chr6:150863000-150867600	Weak transcription	Lung	lung
4	chr6:150863400-150867000	Weak transcription	Fetal Heart	heart
5	chr6:150863600-150867600	Weak transcription	Fetal Stomach	stomach
6	chr6:150864000-150867600	Weak transcription	Liver	Liver
7	chr6:150864200-150867400	Weak transcription	Fetal Muscle Leg	muscle
8	chr6:150864200-150868400	Weak transcription	Fetal Lung	lung
9	chr6:150865200-150865800	Enhancers	HMEC	breast
10	chr6:150865400-150866200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
11	chr6:150865600-150868000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

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