Variant report

Variant rs59746366
Chromosome Location chr9:534588-534589
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:60 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:520600-535000 Weak transcription Gastric stomach
2 chr9:523800-535000 Weak transcription Lung lung
3 chr9:526400-535000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr9:527600-534800 Weak transcription Psoas Muscle Psoas
5 chr9:527600-535000 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr9:528000-537400 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr9:530000-535000 Weak transcription Ovary ovary
8 chr9:530600-534600 Enhancers Brain Hippocampus Middle brain
9 chr9:530600-535200 Enhancers Brain Cingulate Gyrus brain
10 chr9:530800-535200 Enhancers Brain Inferior Temporal Lobe brain
11 chr9:530800-538400 Enhancers Breast Myoepithelial Primary Cells Breast
12 chr9:531200-534800 Enhancers Brain Substantia Nigra brain
13 chr9:531200-538000 Enhancers Brain Anterior Caudate brain
14 chr9:531400-535000 Weak transcription Left Ventricle heart
15 chr9:531400-535200 Weak transcription Stomach Smooth Muscle stomach
16 chr9:531400-546400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr9:531600-535000 Weak transcription Skeletal Muscle Female skeletal muscle
18 chr9:531600-535800 Enhancers Brain Angular Gyrus brain
19 chr9:531800-535400 Enhancers Fetal Lung lung
20 chr9:532000-535000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
21 chr9:532000-535200 Weak transcription Aorta Aorta
22 chr9:532000-535200 Enhancers Fetal Heart heart
23 chr9:532000-535200 Weak transcription Right Ventricle heart
24 chr9:532000-538600 Enhancers Fetal Muscle Leg muscle
25 chr9:532400-535600 Enhancers Fetal Intestine Large intestine
26 chr9:532400-538400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
27 chr9:532600-535400 Enhancers Fetal Intestine Small intestine
28 chr9:532800-535600 Enhancers HUES48 Cell Line embryonic stem cell
29 chr9:532800-535600 Enhancers Duodenum Mucosa Duodenum
30 chr9:532800-538400 Enhancers Cortex derived primary cultured neurospheres brain
31 chr9:533000-534800 Weak transcription Fetal Muscle Trunk muscle
32 chr9:533000-535800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr9:533200-534600 Weak transcription ES-I3 Cell Line embryonic stem cell
34 chr9:533200-534800 Weak transcription HUES64 Cell Line embryonic stem cell
35 chr9:533200-537000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr9:533400-534600 Weak transcription Colon Smooth Muscle Colon
37 chr9:533400-536800 Weak transcription Primary T helper naive cells fromperipheralblood blood
38 chr9:533400-537000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr9:533400-540000 Weak transcription A549 lung
40 chr9:533600-535000 Weak transcription Rectal Smooth Muscle rectum
41 chr9:533600-536000 Enhancers HMEC breast
42 chr9:533800-534600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
43 chr9:533800-535000 Weak transcription Esophagus oesophagus
44 chr9:533800-535000 Weak transcription Pancreas Pancrea
45 chr9:534000-534800 Enhancers Fetal Kidney kidney
46 chr9:534000-535000 Weak transcription H1 Cell Line embryonic stem cell
47 chr9:534000-535000 Weak transcription Rectal Mucosa Donor 31 rectum
48 chr9:534000-535000 Weak transcription Small Intestine intestine
49 chr9:534000-535200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr9:534000-536000 Enhancers iPS-18 Cell Line embryonic stem cell

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