Variant report

Variant rs59797139
Chromosome Location chr5:60178832-60178833
allele -/AT
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:60167200-60192600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr5:60167400-60186000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
3 chr5:60167800-60182000 Weak transcription Left Ventricle heart
4 chr5:60167800-60187800 Weak transcription Primary T cells from cord blood blood
5 chr5:60167800-60188400 Weak transcription Liver Liver
6 chr5:60167800-60192800 Weak transcription Primary hematopoietic stem cells blood
7 chr5:60167800-60228200 Weak transcription Psoas Muscle Psoas
8 chr5:60168400-60191000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr5:60169000-60185800 Weak transcription Adipose Nuclei Adipose
10 chr5:60169800-60191000 Weak transcription NH-A brain
11 chr5:60175200-60188400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr5:60175200-60188400 Weak transcription Right Ventricle heart
13 chr5:60175800-60188200 Weak transcription Gastric stomach
14 chr5:60175800-60188200 Weak transcription Stomach Smooth Muscle stomach
15 chr5:60175800-60239400 Weak transcription NHEK skin
16 chr5:60176400-60220400 Weak transcription Esophagus oesophagus
17 chr5:60176600-60179600 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
18 chr5:60176600-60188000 Weak transcription Skeletal Muscle Male skeletal muscle
19 chr5:60176800-60180000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
20 chr5:60176800-60188200 Weak transcription Breast Myoepithelial Primary Cells Breast
21 chr5:60177000-60190400 Weak transcription HSMM muscle
22 chr5:60177200-60179200 Weak transcription Fetal Lung lung
23 chr5:60177200-60188800 Weak transcription Monocytes-CD14+_RO01746 blood
24 chr5:60177200-60189800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
25 chr5:60177200-60239600 Weak transcription HSMMtube muscle
26 chr5:60177400-60180800 Weak transcription Ovary ovary
27 chr5:60177400-60188200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr5:60177400-60188600 Weak transcription A549 lung
29 chr5:60177400-60188800 Weak transcription Primary B cells from cord blood blood
30 chr5:60177400-60188800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr5:60177400-60192600 Weak transcription Primary T cells fromperipheralblood blood
32 chr5:60177400-60232800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr5:60177600-60188200 Weak transcription Skeletal Muscle Female skeletal muscle
34 chr5:60177600-60213000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
35 chr5:60177800-60179200 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
36 chr5:60177800-60188200 Weak transcription Primary hematopoietic stem cells short term culture blood
37 chr5:60178000-60188200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr5:60178000-60214200 Weak transcription Fetal Kidney kidney
39 chr5:60178200-60179000 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
40 chr5:60178200-60185000 Weak transcription Placenta Placenta
41 chr5:60178200-60188000 Weak transcription Fetal Intestine Large intestine
42 chr5:60178200-60188400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
43 chr5:60178400-60179200 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
44 chr5:60178400-60179400 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr5:60178400-60187200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
46 chr5:60178400-60187600 Weak transcription Brain Germinal Matrix brain
47 chr5:60178400-60188800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr5:60178600-60179000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
49 chr5:60178600-60183000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr5:60178600-60184800 Weak transcription Sigmoid Colon Sigmoid Colon

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