The 2.0 version of rSNPBase

Variant report

Variant rs59870589
Chromosome Location chr2:56098643-56098644
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:56089200-56112200 Weak transcription Pancreas Pancrea
2 chr2:56090000-56107600 Weak transcription Fetal Stomach stomach
3 chr2:56090200-56107400 Weak transcription Fetal Lung lung
4 chr2:56091200-56102600 Weak transcription Hela-S3 cervix
5 chr2:56092000-56099200 Genic enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
6 chr2:56092400-56100000 Genic enhancers Osteobl bone
7 chr2:56092400-56111600 Genic enhancers HUVEC blood vessel
8 chr2:56092600-56102600 Strong transcription HSMM muscle
9 chr2:56092800-56107800 Weak transcription Brain Anterior Caudate brain
10 chr2:56092800-56112400 Weak transcription Stomach Smooth Muscle stomach
11 chr2:56092800-56114400 Weak transcription Brain Cingulate Gyrus brain
12 chr2:56093800-56109000 Strong transcription Breast Myoepithelial Primary Cells Breast
13 chr2:56094800-56116200 Weak transcription Spleen Spleen
14 chr2:56095000-56102600 Weak transcription A549 lung
15 chr2:56095600-56109600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr2:56096000-56106000 Weak transcription Ovary ovary
17 chr2:56097000-56099000 Strong transcription HSMMtube muscle
18 chr2:56097000-56108800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr2:56097400-56099000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr2:56097400-56099000 Genic enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr2:56097400-56102000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr2:56097400-56102400 Weak transcription Muscle Satellite Cultured Cells --
23 chr2:56097600-56098800 Strong transcription Aorta Aorta
24 chr2:56097600-56099000 Strong transcription NHLF lung
25 chr2:56097600-56099200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr2:56097600-56102800 Strong transcription Adipose Nuclei Adipose
27 chr2:56097800-56099000 Strong transcription NHEK skin
28 chr2:56098000-56099600 Enhancers Primary monocytes fromperipheralblood blood
29 chr2:56098000-56107600 Weak transcription Lung lung
30 chr2:56098200-56099600 Enhancers Monocytes-CD14+_RO01746 blood
31 chr2:56098200-56102600 Weak transcription HMEC breast
32 chr2:56098400-56099200 Enhancers Primary B cells from peripheral blood blood
33 chr2:56098600-56099000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr2:56098600-56099000 Enhancers Right Atrium heart
35 chr2:56098600-56099000 Enhancers GM12878-XiMat blood
36 chr2:56098600-56099200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr2:56098600-56099200 Enhancers Placenta Placenta
38 chr2:56098600-56099200 Enhancers NHDF-Ad bronchial
39 chr2:56098600-56102600 Weak transcription NH-A brain
40 chr2:56098600-56107000 Weak transcription Placenta Amnion Placenta Amnion

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Last update: Aug 31, 2015