Variant report

Variant rs59888683
Chromosome Location chr15:79049464-79049465
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:80 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:79040600-79060000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr15:79042800-79055400 Enhancers Right Ventricle heart
3 chr15:79043400-79049600 Weak transcription Pancreas Pancrea
4 chr15:79043600-79049600 Weak transcription Colonic Mucosa Colon
5 chr15:79043600-79049800 Weak transcription Fetal Brain Female brain
6 chr15:79043600-79077800 Weak transcription Brain Germinal Matrix brain
7 chr15:79043800-79049600 Weak transcription Lung lung
8 chr15:79043800-79052000 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr15:79043800-79053400 Weak transcription Duodenum Mucosa Duodenum
10 chr15:79044000-79049600 Weak transcription Stomach Mucosa stomach
11 chr15:79044000-79050000 Enhancers Skeletal Muscle Female skeletal muscle
12 chr15:79044000-79052600 Weak transcription Primary T killer naive cells fromperipheralblood blood
13 chr15:79044200-79059000 Enhancers Fetal Muscle Trunk muscle
14 chr15:79045000-79055800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr15:79045000-79059000 Enhancers Fetal Muscle Leg muscle
16 chr15:79046200-79054600 Enhancers Fetal Heart heart
17 chr15:79046400-79063200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr15:79046800-79050200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr15:79047000-79053200 Enhancers Stomach Smooth Muscle stomach
20 chr15:79047200-79053600 Enhancers NHDF-Ad bronchial
21 chr15:79047200-79054600 Enhancers HSMMtube muscle
22 chr15:79047600-79049600 Weak transcription Fetal Lung lung
23 chr15:79048000-79050200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
24 chr15:79048000-79050200 Enhancers Fetal Adrenal Gland Adrenal Gland
25 chr15:79048000-79050200 Enhancers HMEC breast
26 chr15:79048200-79049600 Weak transcription Primary T helper cells PMA-I stimulated --
27 chr15:79048200-79050200 Enhancers NH-A brain
28 chr15:79048200-79050400 Enhancers Adipose Nuclei Adipose
29 chr15:79048200-79051200 Enhancers HUVEC blood vessel
30 chr15:79048200-79055200 Enhancers Primary B cells from cord blood blood
31 chr15:79048200-79057000 Enhancers Primary B cells from peripheral blood blood
32 chr15:79048400-79050000 Enhancers Aorta Aorta
33 chr15:79048400-79050000 Enhancers Brain Hippocampus Middle brain
34 chr15:79048600-79050000 Enhancers Brain Angular Gyrus brain
35 chr15:79048600-79050200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr15:79048600-79050200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr15:79048600-79054600 Enhancers Placenta Placenta
38 chr15:79048600-79055000 Enhancers Left Ventricle heart
39 chr15:79048800-79049600 Weak transcription Brain Anterior Caudate brain
40 chr15:79048800-79051600 Weak transcription Psoas Muscle Psoas
41 chr15:79049200-79049800 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr15:79049200-79050000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
43 chr15:79049200-79050000 Enhancers Primary T regulatory cells fromperipheralblood blood
44 chr15:79049200-79050000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr15:79049200-79050000 Flanking Active TSS Muscle Satellite Cultured Cells --
46 chr15:79049200-79050000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
47 chr15:79049200-79050000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
48 chr15:79049200-79050000 ZNF genes & repeats Fetal Stomach stomach
49 chr15:79049200-79050000 Enhancers Fetal Thymus thymus
50 chr15:79049200-79050000 Enhancers Rectal Smooth Muscle rectum

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