Variant report

Variant rs5994603
Chromosome Location chr22:21939536-21939537
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:21924400-21941800 Weak transcription H9 Cell Line embryonic stem cell
2 chr22:21924400-21947400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr22:21924800-21942000 Weak transcription Fetal Brain Male brain
4 chr22:21925000-21941800 Weak transcription iPS-18 Cell Line embryonic stem cell
5 chr22:21925600-21946800 Weak transcription HUES64 Cell Line embryonic stem cell
6 chr22:21925800-21946800 Weak transcription HUES48 Cell Line embryonic stem cell
7 chr22:21927800-21941800 Weak transcription iPS-15b Cell Line embryonic stem cell
8 chr22:21927800-21941800 Weak transcription Fetal Brain Female brain
9 chr22:21927800-21942000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
10 chr22:21928000-21941800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr22:21928000-21942400 Weak transcription HUES6 Cell Line embryonic stem cell
12 chr22:21928200-21941800 Weak transcription HSMM muscle
13 chr22:21928200-21943600 Weak transcription H1 Cell Line embryonic stem cell
14 chr22:21928800-21945600 Weak transcription Brain Germinal Matrix brain
15 chr22:21929000-21941800 Weak transcription NH-A brain
16 chr22:21929000-21941800 Weak transcription NHLF lung
17 chr22:21929000-21942000 Weak transcription Rectal Smooth Muscle rectum
18 chr22:21929000-21943800 Weak transcription Hela-S3 cervix
19 chr22:21929000-21945000 Weak transcription HMEC breast
20 chr22:21929000-21947000 Weak transcription HUVEC blood vessel
21 chr22:21929200-21942000 Weak transcription Muscle Satellite Cultured Cells --
22 chr22:21932000-21945200 Weak transcription A549 lung
23 chr22:21933000-21946800 Weak transcription Placenta Amnion Placenta Amnion
24 chr22:21933200-21941800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
25 chr22:21933200-21941800 Weak transcription Right Atrium heart
26 chr22:21933200-21945400 Weak transcription Colonic Mucosa Colon
27 chr22:21933400-21948000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
28 chr22:21933800-21946200 Weak transcription iPS-20b Cell Line embryonic stem cell
29 chr22:21934400-21940800 Strong transcription Fetal Intestine Small intestine
30 chr22:21934400-21942000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr22:21934600-21942000 Weak transcription Rectal Mucosa Donor 29 rectum
32 chr22:21934600-21942200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr22:21934600-21944800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr22:21934600-21945200 Weak transcription Fetal Intestine Large intestine
35 chr22:21934600-21945400 Weak transcription Rectal Mucosa Donor 31 rectum
36 chr22:21934800-21942000 Weak transcription Small Intestine intestine
37 chr22:21936000-21948400 Weak transcription ES-I3 Cell Line embryonic stem cell
38 chr22:21936600-21940800 Genic enhancers Primary T cells fromperipheralblood blood
39 chr22:21937200-21940800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr22:21937200-21943800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr22:21937200-21944400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr22:21937400-21941600 Weak transcription Fetal Muscle Trunk muscle
43 chr22:21937400-21941800 Weak transcription Colon Smooth Muscle Colon
44 chr22:21937400-21942000 Strong transcription Fetal Stomach stomach
45 chr22:21937400-21945200 Weak transcription Aorta Aorta
46 chr22:21937400-21946000 Weak transcription Cortex derived primary cultured neurospheres brain
47 chr22:21937600-21939800 Weak transcription Lung lung
48 chr22:21937600-21940400 Strong transcription Thymus Thymus
49 chr22:21937600-21941800 Weak transcription Primary neutrophils fromperipheralblood blood
50 chr22:21937600-21941800 Weak transcription Duodenum Mucosa Duodenum

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