Variant report

Variant rs59974343
Chromosome Location chr9:545891-545892
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:531400-546400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr9:534800-546200 Weak transcription Fetal Kidney kidney
3 chr9:535400-546200 Weak transcription Esophagus oesophagus
4 chr9:535400-546600 Weak transcription Fetal Intestine Small intestine
5 chr9:535400-549200 Weak transcription Lung lung
6 chr9:535600-546000 Weak transcription Duodenum Mucosa Duodenum
7 chr9:535600-546400 Weak transcription HUES64 Cell Line embryonic stem cell
8 chr9:535600-546600 Weak transcription HUES48 Cell Line embryonic stem cell
9 chr9:535800-546400 Weak transcription H1 Cell Line embryonic stem cell
10 chr9:535800-546600 Weak transcription iPS-20b Cell Line embryonic stem cell
11 chr9:537400-546000 Weak transcription Duodenum Smooth Muscle Duodenum
12 chr9:537400-546400 Weak transcription Rectal Mucosa Donor 29 rectum
13 chr9:537800-546400 Weak transcription Rectal Mucosa Donor 31 rectum
14 chr9:538000-546000 Weak transcription HMEC breast
15 chr9:538400-547600 Weak transcription Psoas Muscle Psoas
16 chr9:538800-546400 Weak transcription Stomach Mucosa stomach
17 chr9:540400-546400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr9:540400-546400 Weak transcription A549 lung
19 chr9:540600-546200 Weak transcription Fetal Muscle Leg muscle
20 chr9:540600-549200 Weak transcription Fetal Intestine Large intestine
21 chr9:543600-546400 Enhancers Brain Hippocampus Middle brain
22 chr9:543600-546800 Enhancers Brain Anterior Caudate brain
23 chr9:543800-546800 Enhancers Brain Substantia Nigra brain
24 chr9:544200-546800 Enhancers Brain Cingulate Gyrus brain
25 chr9:544400-546200 Enhancers Fetal Heart heart
26 chr9:544400-546800 Enhancers Cortex derived primary cultured neurospheres brain
27 chr9:544400-548400 Enhancers Brain Angular Gyrus brain
28 chr9:544600-546600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
29 chr9:544600-546600 Enhancers Right Ventricle heart
30 chr9:544600-546800 Enhancers Fetal Lung lung
31 chr9:544600-546800 Enhancers Right Atrium heart
32 chr9:544600-547200 Enhancers Left Ventricle heart
33 chr9:544600-547600 Enhancers Aorta Aorta
34 chr9:544800-546400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
35 chr9:545000-546600 Enhancers Brain Inferior Temporal Lobe brain
36 chr9:545000-546600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
37 chr9:545000-547800 Enhancers Breast Myoepithelial Primary Cells Breast
38 chr9:545200-546000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
39 chr9:545200-546800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr9:545200-547600 Enhancers Adipose Nuclei Adipose
41 chr9:545400-546800 Enhancers Stomach Smooth Muscle stomach
42 chr9:545400-547000 Enhancers Ovary ovary
43 chr9:545400-547200 Enhancers Colon Smooth Muscle Colon
44 chr9:545400-547600 Enhancers Rectal Smooth Muscle rectum
45 chr9:545600-546400 Weak transcription Pancreas Pancrea
46 chr9:545600-546400 Weak transcription Small Intestine intestine
47 chr9:545600-547200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr9:545600-547200 Enhancers NHEK skin
49 chr9:545800-546200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr9:545800-546200 Enhancers Fetal Muscle Trunk muscle

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