Variant report

Variant	rs60012001
Chromosome Location	chr7:147368242-147368243
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs57163289	1.00[AMR][1000 genomes]
rs59769790	1.00[AMR][1000 genomes]
rs61584584	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73458219	1.00[AMR][1000 genomes]
rs73458225	1.00[AMR][1000 genomes]
rs73458236	1.00[AMR][1000 genomes]
rs73458238	1.00[AMR][1000 genomes]
rs73472814	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv931005	chr7:146730472-147381257	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:147367000-147369000	Weak transcription	Brain Substantia Nigra	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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