Variant report

Variant	rs601598
Chromosome Location	chr3:23040110-23040111
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs506284	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs520582	0.85[EUR][1000 genomes]
rs528649	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs529219	0.80[CHB][hapmap];0.83[EUR][1000 genomes]
rs535689	0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs537660	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs549968	0.85[CHB][hapmap];0.85[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs55652823	0.87[EUR][1000 genomes]
rs621200	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs633464	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs711725	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs822768	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs822775	0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:23032600-23041000	Weak transcription	Skeletal Muscle Male	skeletal muscle
2	chr3:23038400-23042800	Weak transcription	Pancreas	Pancrea
3	chr3:23038600-23042000	Weak transcription	Psoas Muscle	Psoas
4	chr3:23038800-23040800	Weak transcription	Skeletal Muscle Female	skeletal muscle

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links