Variant report

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs1160365	0.84[EUR][1000 genomes]
rs34016617	0.97[EUR][1000 genomes]
rs34096340	0.84[EUR][1000 genomes]
rs34097439	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs34123386	0.84[EUR][1000 genomes]
rs35671594	0.84[EUR][1000 genomes]
rs35675087	0.97[EUR][1000 genomes]
rs6036634	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6036639	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6036641	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6036647	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6049384	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6049385	0.80[ASN][1000 genomes]
rs6049387	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6049388	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6049395	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6114474	0.80[ASN][1000 genomes]
rs6132697	0.97[EUR][1000 genomes]
rs6132698	0.97[EUR][1000 genomes]
rs6132699	0.86[EUR][1000 genomes]
rs6132702	0.84[EUR][1000 genomes]
rs6138198	1.00[EUR][1000 genomes]
rs6138199	0.97[EUR][1000 genomes]
rs6138206	0.92[EUR][1000 genomes]
rs6138211	0.84[EUR][1000 genomes]
rs6138213	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs62193667	0.97[EUR][1000 genomes]
rs74173629	0.86[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv9793	chr20:23939613-24734850	Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
2	nsv1056491	chr20:23955040-24105080	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr20:24060200-24062200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr20:24060400-24062200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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