Variant report

Variant rs6049828
Chromosome Location chr20:24627964-24627965
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:17 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:24615400-24633800 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr20:24616200-24639600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
3 chr20:24616400-24630200 Weak transcription Brain Angular Gyrus brain
4 chr20:24620000-24641200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr20:24625200-24630600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
6 chr20:24625600-24629400 Weak transcription Osteobl bone
7 chr20:24625600-24633800 Weak transcription Spleen Spleen
8 chr20:24625800-24628600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr20:24626000-24629000 Enhancers Thymus Thymus
10 chr20:24626000-24629600 Enhancers Fetal Thymus thymus
11 chr20:24626400-24629000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr20:24626600-24628600 Weak transcription Brain Substantia Nigra brain
13 chr20:24626600-24628800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr20:24626800-24628600 Weak transcription Brain Hippocampus Middle brain
15 chr20:24627000-24629400 Weak transcription Brain Inferior Temporal Lobe brain
16 chr20:24627400-24630200 Weak transcription Primary hematopoietic stem cells short term culture blood
17 chr20:24627600-24628600 Enhancers HMEC breast

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