The 2.0 version of rSNPBase

Variant report

Variant rs60523332
Chromosome Location chr2:33437466-33437467
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:33403800-33489800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr2:33409200-33441600 Weak transcription Psoas Muscle Psoas
3 chr2:33410400-33438000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr2:33414600-33455400 Weak transcription Fetal Stomach stomach
5 chr2:33415200-33441600 Weak transcription Fetal Muscle Trunk muscle
6 chr2:33415400-33441600 Weak transcription Fetal Muscle Leg muscle
7 chr2:33423000-33439400 Weak transcription Pancreas Pancrea
8 chr2:33423000-33439600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr2:33428600-33439200 Weak transcription Right Atrium heart
10 chr2:33431800-33439000 Enhancers NHDF-Ad bronchial
11 chr2:33434200-33438200 Enhancers K562 blood
12 chr2:33434200-33439400 Enhancers Muscle Satellite Cultured Cells --
13 chr2:33434200-33442200 Enhancers HUVEC blood vessel
14 chr2:33434600-33439400 Weak transcription Lung lung
15 chr2:33434600-33439400 Weak transcription Right Ventricle heart
16 chr2:33434800-33437600 Enhancers NHEK skin
17 chr2:33434800-33437800 Enhancers Stomach Mucosa stomach
18 chr2:33434800-33437800 Enhancers HMEC breast
19 chr2:33434800-33438000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr2:33435000-33437800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr2:33435000-33439000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr2:33435000-33439400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr2:33435200-33438200 Enhancers Ovary ovary
24 chr2:33435800-33437800 Enhancers Hela-S3 cervix
25 chr2:33435800-33444400 Weak transcription ES-WA7 Cell Line embryonic stem cell
26 chr2:33436000-33438000 Enhancers NHLF lung
27 chr2:33436000-33438800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr2:33436000-33439400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
29 chr2:33436000-33441000 Enhancers Stomach Smooth Muscle stomach
30 chr2:33436200-33440000 Weak transcription Cortex derived primary cultured neurospheres brain
31 chr2:33436400-33439600 Enhancers Aorta Aorta
32 chr2:33436400-33439800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
33 chr2:33436400-33442200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr2:33436600-33438000 Enhancers Fetal Heart heart
35 chr2:33436600-33440200 Weak transcription HSMM muscle
36 chr2:33436600-33441600 Weak transcription Breast Myoepithelial Primary Cells Breast
37 chr2:33436600-33444200 Weak transcription Brain Hippocampus Middle brain
38 chr2:33436800-33437800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
39 chr2:33436800-33439200 Weak transcription Left Ventricle heart
40 chr2:33436800-33440200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr2:33436800-33440400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr2:33436800-33443800 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
43 chr2:33436800-33455000 Weak transcription Duodenum Smooth Muscle Duodenum
44 chr2:33437000-33437600 Enhancers Liver Liver
45 chr2:33437000-33437600 Enhancers HepG2 liver
46 chr2:33437000-33437800 Enhancers Fetal Adrenal Gland Adrenal Gland
47 chr2:33437000-33438000 Flanking Active TSS A549 lung
48 chr2:33437200-33437600 Enhancers Rectal Smooth Muscle rectum
49 chr2:33437200-33437600 Enhancers Osteobl bone
50 chr2:33437200-33443400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015