The 2.0 version of rSNPBase

Variant report

Variant rs60590154
Chromosome Location chr1:215796575-215796576
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:96 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:215741800-215809800 Weak transcription Colonic Mucosa Colon
2 chr1:215750000-215805000 Weak transcription Lung lung
3 chr1:215750200-215804400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr1:215750200-215809200 Weak transcription Gastric stomach
5 chr1:215755800-215804800 Weak transcription ES-WA7 Cell Line embryonic stem cell
6 chr1:215773800-215798600 Weak transcription ES-I3 Cell Line embryonic stem cell
7 chr1:215779400-215799200 Weak transcription Psoas Muscle Psoas
8 chr1:215781000-215797200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
9 chr1:215781200-215797400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr1:215782200-215799400 Weak transcription Fetal Heart heart
11 chr1:215782800-215797200 Weak transcription Dnd41 blood
12 chr1:215783000-215798800 Weak transcription Brain Inferior Temporal Lobe brain
13 chr1:215784800-215796600 Weak transcription Spleen Spleen
14 chr1:215786600-215809400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr1:215786800-215797400 Weak transcription Fetal Brain Female brain
16 chr1:215786800-215798200 Weak transcription Brain Cingulate Gyrus brain
17 chr1:215786800-215799000 Weak transcription Small Intestine intestine
18 chr1:215786800-215801000 Weak transcription H9 Cell Line embryonic stem cell
19 chr1:215787200-215798400 Weak transcription Primary T cells from cord blood blood
20 chr1:215787200-215800600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
21 chr1:215787200-215810200 Weak transcription Pancreatic Islets Pancreatic Islet
22 chr1:215787400-215797000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr1:215787600-215801800 Weak transcription Skeletal Muscle Male skeletal muscle
24 chr1:215789000-215797000 Strong transcription Fetal Intestine Large intestine
25 chr1:215789000-215797000 Strong transcription Fetal Muscle Trunk muscle
26 chr1:215789000-215799200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr1:215789200-215797000 Strong transcription Adipose Nuclei Adipose
28 chr1:215789200-215797400 Strong transcription Breast Myoepithelial Primary Cells Breast
29 chr1:215790200-215797600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr1:215790400-215797000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
31 chr1:215791000-215804400 Weak transcription Esophagus oesophagus
32 chr1:215791000-215805000 Weak transcription Fetal Intestine Small intestine
33 chr1:215791400-215796800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr1:215791400-215797000 Strong transcription HUES64 Cell Line embryonic stem cell
35 chr1:215791600-215797400 Strong transcription Fetal Kidney kidney
36 chr1:215791600-215798000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr1:215791600-215799400 Weak transcription Right Ventricle heart
38 chr1:215791800-215797600 Strong transcription Osteobl bone
39 chr1:215792000-215797000 Strong transcription Primary monocytes fromperipheralblood blood
40 chr1:215792200-215800000 Strong transcription Liver Liver
41 chr1:215792400-215810200 Weak transcription Aorta Aorta
42 chr1:215792600-215796600 Weak transcription Brain Hippocampus Middle brain
43 chr1:215792600-215798800 Weak transcription Brain Substantia Nigra brain
44 chr1:215792600-215801800 Weak transcription Fetal Stomach stomach
45 chr1:215792600-215802800 Weak transcription Fetal Brain Male brain
46 chr1:215792600-215804400 Weak transcription NHEK skin
47 chr1:215792600-215809800 Weak transcription Pancreas Pancrea
48 chr1:215792800-215796800 Weak transcription Stomach Smooth Muscle stomach
49 chr1:215793600-215804400 Weak transcription Cortex derived primary cultured neurospheres brain
50 chr1:215793800-215798200 Weak transcription Fetal Thymus thymus

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Last update: Aug 31, 2015