The 2.0 version of rSNPBase

Variant report

Variant rs60681937
Chromosome Location chr4:79516272-79516273
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:79474400-79527200 Weak transcription Spleen Spleen
2 chr4:79481800-79521000 Weak transcription Right Ventricle heart
3 chr4:79483000-79530000 Weak transcription H9 Cell Line embryonic stem cell
4 chr4:79488400-79523600 Weak transcription Esophagus oesophagus
5 chr4:79488400-79527400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr4:79490000-79523400 Weak transcription Colon Smooth Muscle Colon
7 chr4:79490600-79521000 Weak transcription Fetal Heart heart
8 chr4:79490800-79532600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr4:79491000-79529600 Weak transcription Aorta Aorta
10 chr4:79491200-79535400 Weak transcription ES-WA7 Cell Line embryonic stem cell
11 chr4:79491800-79533200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr4:79491800-79542600 Weak transcription NH-A brain
13 chr4:79492000-79531600 Strong transcription HMEC breast
14 chr4:79500000-79522200 Strong transcription Breast Myoepithelial Primary Cells Breast
15 chr4:79502200-79529200 Weak transcription Colonic Mucosa Colon
16 chr4:79502400-79525800 Weak transcription Psoas Muscle Psoas
17 chr4:79502400-79532200 Strong transcription Primary neutrophils fromperipheralblood blood
18 chr4:79503200-79521800 Weak transcription H1 Cell Line embryonic stem cell
19 chr4:79505800-79517200 Weak transcription Duodenum Smooth Muscle Duodenum
20 chr4:79506400-79517200 Weak transcription Pancreas Pancrea
21 chr4:79506400-79517200 Weak transcription Sigmoid Colon Sigmoid Colon
22 chr4:79506800-79523800 Weak transcription Placenta Placenta
23 chr4:79507600-79521000 Weak transcription Primary hematopoietic stem cells blood
24 chr4:79508200-79533600 Weak transcription iPS-20b Cell Line embryonic stem cell
25 chr4:79508600-79523600 Weak transcription Adipose Nuclei Adipose
26 chr4:79508800-79525400 Weak transcription HUES48 Cell Line embryonic stem cell
27 chr4:79508800-79527000 Weak transcription ES-I3 Cell Line embryonic stem cell
28 chr4:79508800-79527400 Weak transcription iPS-18 Cell Line embryonic stem cell
29 chr4:79510000-79517200 Weak transcription Fetal Stomach stomach
30 chr4:79510000-79518800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr4:79510000-79520600 Weak transcription Lung lung
32 chr4:79510800-79520800 Weak transcription Left Ventricle heart
33 chr4:79510800-79523400 Weak transcription A549 lung
34 chr4:79511000-79523800 Weak transcription Hela-S3 cervix
35 chr4:79512400-79523600 Weak transcription Gastric stomach
36 chr4:79512400-79524400 Weak transcription Rectal Smooth Muscle rectum
37 chr4:79512600-79534200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr4:79512600-79536800 Weak transcription Rectal Mucosa Donor 29 rectum
39 chr4:79512800-79525600 Weak transcription NHLF lung
40 chr4:79513600-79516400 Strong transcription Fetal Intestine Large intestine
41 chr4:79513600-79516400 Weak transcription HUVEC blood vessel
42 chr4:79513600-79516600 Weak transcription Rectal Mucosa Donor 31 rectum
43 chr4:79513600-79517200 Weak transcription HUES64 Cell Line embryonic stem cell
44 chr4:79513600-79521000 Strong transcription Placenta Amnion Placenta Amnion
45 chr4:79513800-79516800 Weak transcription Duodenum Mucosa Duodenum
46 chr4:79513800-79521000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr4:79513800-79534200 Strong transcription NHEK skin
48 chr4:79514000-79517000 Weak transcription Stomach Mucosa stomach
49 chr4:79514200-79517200 Weak transcription K562 blood
50 chr4:79514200-79517800 Weak transcription Pancreatic Islets Pancreatic Islet

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Last update: Aug 31, 2015