The 2.0 version of rSNPBase

Variant report

Variant rs60789444
Chromosome Location chr1:211459891-211459892
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:211434400-211487000 Weak transcription Gastric stomach
2 chr1:211434600-211462600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr1:211434600-211478200 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr1:211434800-211462600 Weak transcription H9 Cell Line embryonic stem cell
5 chr1:211434800-211464800 Weak transcription Right Ventricle heart
6 chr1:211434800-211474200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
7 chr1:211435600-211460800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr1:211438800-211478800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
9 chr1:211439800-211478200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
10 chr1:211440800-211481800 Strong transcription Monocytes-CD14+_RO01746 blood
11 chr1:211440800-211483600 Strong transcription Primary monocytes fromperipheralblood blood
12 chr1:211441200-211461200 Strong transcription Primary neutrophils fromperipheralblood blood
13 chr1:211443000-211480000 Strong transcription Dnd41 blood
14 chr1:211443000-211480400 Strong transcription Placenta Placenta
15 chr1:211443200-211460800 Strong transcription Rectal Mucosa Donor 29 rectum
16 chr1:211443200-211484000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr1:211443800-211460400 Strong transcription Primary B cells from peripheral blood blood
18 chr1:211443800-211478200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
19 chr1:211444400-211479000 Strong transcription Liver Liver
20 chr1:211444600-211471000 Strong transcription iPS-20b Cell Line embryonic stem cell
21 chr1:211444600-211478000 Strong transcription Primary T regulatory cells fromperipheralblood blood
22 chr1:211444600-211479200 Strong transcription Primary T cells fromperipheralblood blood
23 chr1:211444800-211460600 Strong transcription HSMM muscle
24 chr1:211444800-211491200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
25 chr1:211445200-211460400 Weak transcription Psoas Muscle Psoas
26 chr1:211445800-211462400 Weak transcription Primary T killer naive cells fromperipheralblood blood
27 chr1:211445800-211462400 Weak transcription Primary T killer memory cells from peripheral blood blood
28 chr1:211445800-211486800 Weak transcription Esophagus oesophagus
29 chr1:211446000-211462600 Weak transcription Rectal Smooth Muscle rectum
30 chr1:211447800-211479200 Strong transcription Primary T helper cells fromperipheralblood blood
31 chr1:211447800-211486200 Weak transcription Stomach Mucosa stomach
32 chr1:211448800-211461000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr1:211449000-211479800 Strong transcription Fetal Thymus thymus
34 chr1:211449400-211482000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr1:211450200-211462600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr1:211450400-211480200 Strong transcription Duodenum Mucosa Duodenum
37 chr1:211450800-211461200 Strong transcription Rectal Mucosa Donor 31 rectum
38 chr1:211451000-211461200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr1:211451000-211467600 Strong transcription Fetal Adrenal Gland Adrenal Gland
40 chr1:211452200-211469400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
41 chr1:211453200-211466600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
42 chr1:211453800-211460600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr1:211453800-211462200 Weak transcription Fetal Heart heart
44 chr1:211453800-211462600 Weak transcription Placenta Amnion Placenta Amnion
45 chr1:211454000-211460600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
46 chr1:211454000-211462600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
47 chr1:211454000-211462600 Weak transcription Brain Substantia Nigra brain
48 chr1:211454400-211460400 Weak transcription Ovary ovary
49 chr1:211454600-211463200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
50 chr1:211454600-211463600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015