Variant report

Variant	rs60916361
Chromosome Location	chr14:32702391-32702392
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs17098620	0.86[AFR][1000 genomes]
rs57590323	0.83[AFR][1000 genomes]
rs57917396	0.83[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832764	chr14:32564468-32723213	Active TSS Weak transcription Enhancers ZNF genes & repeats Strong transcription Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
2	esv3527777	chr14:32669175-32761850	Flanking Active TSS Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
3	esv3527778	chr14:32669175-32761850	Enhancers Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
4	nsv564184	chr14:32688214-32734691	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:32698400-32702600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
2	chr14:32698400-32702800	Enhancers	NHEK	skin
3	chr14:32698400-32703000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr14:32698400-32703800	Enhancers	Hela-S3	cervix
5	chr14:32698600-32702800	Enhancers	Breast Myoepithelial Primary Cells	Breast
6	chr14:32698600-32703000	Enhancers	HMEC	breast
7	chr14:32700800-32702800	Weak transcription	Osteobl	bone
8	chr14:32701000-32702800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
9	chr14:32701200-32713600	Weak transcription	Left Ventricle	heart
10	chr14:32701600-32703600	Enhancers	Duodenum Mucosa	Duodenum
11	chr14:32701800-32702400	Enhancers	Small Intestine	intestine
12	chr14:32702000-32703000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
13	chr14:32702000-32703200	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
14	chr14:32702200-32702400	Enhancers	Primary hematopoietic stem cells	blood
15	chr14:32702200-32702400	Enhancers	Right Atrium	heart
16	chr14:32702200-32702800	Enhancers	Primary T killer memory cells from peripheral blood	blood
17	chr14:32702200-32703000	Enhancers	Primary T helper cells fromperipheralblood	blood
18	chr14:32702200-32703200	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
19	chr14:32702200-32703400	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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