The 2.0 version of rSNPBase

Variant report

Variant rs60920006
Chromosome Location chr2:55597946-55597947
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:80 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:55510200-55616800 Weak transcription Fetal Intestine Small intestine
2 chr2:55523600-55600600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr2:55537800-55609400 Weak transcription Lung lung
4 chr2:55542400-55644800 Weak transcription Primary T cells from cord blood blood
5 chr2:55555200-55635800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr2:55564200-55605200 Weak transcription Fetal Kidney kidney
7 chr2:55572000-55610200 Weak transcription Liver Liver
8 chr2:55576000-55612200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
9 chr2:55579200-55602200 Weak transcription iPS-18 Cell Line embryonic stem cell
10 chr2:55579200-55640800 Weak transcription Fetal Brain Male brain
11 chr2:55579400-55614400 Weak transcription Fetal Brain Female brain
12 chr2:55579400-55622400 Weak transcription ES-I3 Cell Line embryonic stem cell
13 chr2:55579400-55644400 Weak transcription Primary B cells from cord blood blood
14 chr2:55579600-55632200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
15 chr2:55582000-55632400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr2:55582200-55603600 Weak transcription Ovary ovary
17 chr2:55582800-55615000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
18 chr2:55583200-55605000 Weak transcription HepG2 liver
19 chr2:55583400-55602000 Weak transcription Left Ventricle heart
20 chr2:55583400-55602400 Weak transcription Primary neutrophils fromperipheralblood blood
21 chr2:55583600-55606800 Weak transcription H1 Cell Line embryonic stem cell
22 chr2:55583600-55607200 Weak transcription Skeletal Muscle Female skeletal muscle
23 chr2:55584200-55612000 Weak transcription Fetal Muscle Trunk muscle
24 chr2:55584400-55598800 Weak transcription Fetal Muscle Leg muscle
25 chr2:55584600-55598000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
26 chr2:55584600-55599600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr2:55587400-55602000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
28 chr2:55589400-55639400 Weak transcription Aorta Aorta
29 chr2:55589600-55599600 Weak transcription iPS-20b Cell Line embryonic stem cell
30 chr2:55589600-55628800 Weak transcription Fetal Thymus thymus
31 chr2:55589600-55632200 Weak transcription HUES6 Cell Line embryonic stem cell
32 chr2:55590200-55599800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr2:55590400-55622400 Weak transcription GM12878-XiMat blood
34 chr2:55591000-55646000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
35 chr2:55591600-55598000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr2:55591600-55598200 Weak transcription HUES64 Cell Line embryonic stem cell
37 chr2:55592000-55635400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr2:55592200-55599200 Weak transcription NHDF-Ad bronchial
39 chr2:55592200-55599600 Weak transcription HSMM muscle
40 chr2:55592200-55599800 Weak transcription Fetal Lung lung
41 chr2:55592200-55600200 Weak transcription Adipose Nuclei Adipose
42 chr2:55592200-55617600 Weak transcription Breast Myoepithelial Primary Cells Breast
43 chr2:55592200-55631800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr2:55592800-55598400 Weak transcription Osteobl bone
45 chr2:55592800-55609400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr2:55592800-55609600 Weak transcription Duodenum Smooth Muscle Duodenum
47 chr2:55592800-55615600 Weak transcription NHEK skin
48 chr2:55592800-55617800 Weak transcription A549 lung
49 chr2:55592800-55626600 Weak transcription Muscle Satellite Cultured Cells --
50 chr2:55592800-55635600 Weak transcription HSMMtube muscle

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Last update: Aug 31, 2015