Variant report

Variant	rs60959469
Chromosome Location	chr7:137491469-137491470
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs28491578	0.82[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1022793	chr7:137187383-137619359	Weak transcription Enhancers Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:137486000-137501800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
2	chr7:137486600-137501800	Weak transcription	HSMMtube	muscle
3	chr7:137486800-137493800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr7:137489600-137491800	Enhancers	iPS-15b Cell Line	embryonic stem cell
5	chr7:137490000-137497800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr7:137490200-137492200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
7	chr7:137490200-137501600	Weak transcription	Osteobl	bone
8	chr7:137490200-137504600	Weak transcription	Brain Inferior Temporal Lobe	brain
9	chr7:137490200-137505200	Weak transcription	NH-A	brain
10	chr7:137490400-137493600	Weak transcription	Aorta	Aorta
11	chr7:137490400-137498000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
12	chr7:137490400-137501000	Weak transcription	Muscle Satellite Cultured Cells	--
13	chr7:137490400-137505200	Weak transcription	HSMM	muscle
14	chr7:137491000-137492400	Weak transcription	Fetal Stomach	stomach
15	chr7:137491000-137498000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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