Variant report

Variant	rs60987662
Chromosome Location	chr7:101844851-101844852
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs1108056	0.87[AFR][1000 genomes];0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11540899	0.86[AFR][1000 genomes];0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12537077	0.92[AFR][1000 genomes];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs372968	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs375445	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs382947	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs385417	0.92[EUR][1000 genomes]
rs408425	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs409224	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs41275218	0.88[AFR][1000 genomes];0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs420920	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs423452	0.85[ASN][1000 genomes]
rs434624	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs437060	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs448775	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs56077916	0.99[AFR][1000 genomes];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs56235745	0.83[AFR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs67531258	0.83[AFR][1000 genomes];0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6970036	0.86[ASN][1000 genomes]
rs6976947	0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]

No data

Chromatin state (count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:101797800-101852200	Weak transcription	NHEK	skin
2	chr7:101800400-101850000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
3	chr7:101800600-101851800	Strong transcription	Fetal Intestine Small	intestine
4	chr7:101801200-101864000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr7:101805400-101862200	Strong transcription	Primary neutrophils fromperipheralblood	blood
6	chr7:101808400-101868400	Strong transcription	Thymus	Thymus
7	chr7:101812400-101860800	Strong transcription	Primary hematopoietic stem cells short term culture	blood
8	chr7:101812600-101863200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
9	chr7:101812600-101867000	Strong transcription	Primary monocytes fromperipheralblood	blood
10	chr7:101812600-101867000	Strong transcription	Monocytes-CD14+_RO01746	blood
11	chr7:101813200-101852000	Weak transcription	NHDF-Ad	bronchial
12	chr7:101813800-101860800	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
13	chr7:101814000-101863600	Weak transcription	HUVEC	blood vessel
14	chr7:101814200-101858600	Weak transcription	Right Atrium	heart
15	chr7:101816000-101859800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
16	chr7:101817200-101851200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
17	chr7:101820600-101860200	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
18	chr7:101821200-101857200	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
19	chr7:101823400-101853800	Weak transcription	Fetal Kidney	kidney
20	chr7:101824400-101851200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
21	chr7:101824400-101863400	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
22	chr7:101827600-101845400	Weak transcription	Stomach Mucosa	stomach
23	chr7:101829400-101870800	Weak transcription	Small Intestine	intestine
24	chr7:101829600-101848800	Weak transcription	Brain Angular Gyrus	brain
25	chr7:101831400-101845400	Strong transcription	Liver	Liver
26	chr7:101831600-101850200	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
27	chr7:101831600-101851000	Strong transcription	Breast Myoepithelial Primary Cells	Breast
28	chr7:101831600-101855800	Strong transcription	Left Ventricle	heart
29	chr7:101831800-101852200	Strong transcription	Lung	lung
30	chr7:101832200-101846000	Strong transcription	Adipose Nuclei	Adipose
31	chr7:101832200-101850400	Strong transcription	Primary B cells from peripheral blood	blood
32	chr7:101832200-101858200	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
33	chr7:101832200-101859200	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
34	chr7:101832200-101859400	Strong transcription	Fetal Thymus	thymus
35	chr7:101832200-101863200	Strong transcription	Dnd41	blood
36	chr7:101832400-101853800	Strong transcription	Fetal Muscle Leg	muscle
37	chr7:101832400-101856600	Strong transcription	Stomach Smooth Muscle	stomach
38	chr7:101832400-101864000	Strong transcription	Fetal Stomach	stomach
39	chr7:101832600-101857800	Weak transcription	Fetal Heart	heart
40	chr7:101832600-101860200	Strong transcription	Duodenum Mucosa	Duodenum
41	chr7:101832800-101850600	Strong transcription	Rectal Mucosa Donor 29	rectum
42	chr7:101832800-101852400	Weak transcription	Pancreatic Islets	Pancreatic Islet
43	chr7:101832800-101864800	Strong transcription	Primary T cells from cord blood	blood
44	chr7:101833000-101849800	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
45	chr7:101833000-101850800	Strong transcription	Primary T helper cells fromperipheralblood	blood
46	chr7:101833000-101852800	Strong transcription	Sigmoid Colon	Sigmoid Colon
47	chr7:101833200-101850800	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
48	chr7:101833400-101845600	Weak transcription	Psoas Muscle	Psoas
49	chr7:101833800-101849000	Strong transcription	Cortex derived primary cultured neurospheres	brain
50	chr7:101834000-101849400	Strong transcription	Spleen	Spleen

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