Variant report

Variant	rs6107052
Chromosome Location	chr20:25530838-25530839
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr20:25527993..25531935-chr20:25532103..25536605,5	MCF-7	breast:

Extended variants
information (count: 165 )
Associated
traits (count: 6 )

rSNPs within LD-proxies of this variant (count:148)

rs_ID	r²[population]
rs1047171	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11087520	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11087521	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11699203	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12428	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs13038834	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1541061	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1985737	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2027003	0.83[EUR][1000 genomes]
rs2027004	0.83[EUR][1000 genomes]
rs2104734	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2151144	0.89[EUR][1000 genomes]
rs2179459	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2184000	0.85[EUR][1000 genomes]
rs2263204	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2387880	0.84[EUR][1000 genomes]
rs2387881	0.87[EUR][1000 genomes]
rs2387882	0.83[EUR][1000 genomes]
rs2387883	0.84[EUR][1000 genomes]
rs2387884	0.84[EUR][1000 genomes]
rs2387885	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs2387887	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2387891	0.90[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2424712	0.88[EUR][1000 genomes]
rs2424713	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2424714	0.88[EUR][1000 genomes]
rs2424715	0.87[EUR][1000 genomes]
rs2424716	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2482911	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2482913	0.88[EUR][1000 genomes]
rs2482918	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2482937	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2482940	0.83[EUR][1000 genomes]
rs2482941	0.83[EUR][1000 genomes]
rs2482943	0.87[EUR][1000 genomes]
rs2500399	0.83[EUR][1000 genomes]
rs2500400	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2500401	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2500404	0.82[EUR][1000 genomes]
rs2500405	0.83[EUR][1000 genomes]
rs2500417	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2500418	0.87[EUR][1000 genomes]
rs2500424	0.88[EUR][1000 genomes]
rs2500436	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2500446	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs2500448	0.88[EUR][1000 genomes]
rs2856	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs34645895	0.80[EUR][1000 genomes]
rs372678	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs3761117	0.84[EUR][1000 genomes]
rs397119	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs398036	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs401166	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs404394	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs408853	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs416745	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs417110	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs417130	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs422424	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs422844	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs424487	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4280527	0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs431579	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs433352	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs437635	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs442834	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs446649	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs447722	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs448396	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs449370	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs449703	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs453329	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs454723	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4813561	0.83[EUR][1000 genomes]
rs4813563	0.84[EUR][1000 genomes]
rs4813566	0.84[EUR][1000 genomes]
rs4815407	0.82[EUR][1000 genomes]
rs4815408	0.82[EUR][1000 genomes]
rs4815417	0.84[EUR][1000 genomes]
rs4815418	0.84[EUR][1000 genomes]
rs4815420	0.84[EUR][1000 genomes]
rs4815421	0.83[EUR][1000 genomes]
rs4815423	0.83[EUR][1000 genomes]
rs4815424	0.88[EUR][1000 genomes]
rs4815426	0.85[EUR][1000 genomes]
rs6037103	0.87[EUR][1000 genomes]
rs6037105	0.84[EUR][1000 genomes]
rs6037120	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6037121	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6037125	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6037126	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6050566	0.83[EUR][1000 genomes]
rs6050573	0.82[EUR][1000 genomes]
rs6050583	0.84[EUR][1000 genomes]
rs6050590	0.84[EUR][1000 genomes]
rs6050595	0.81[EUR][1000 genomes]
rs6050598	0.85[EUR][1000 genomes]
rs6050599	0.85[EUR][1000 genomes]
rs6050600	0.82[EUR][1000 genomes]
rs6050602	0.85[EUR][1000 genomes]
rs6050609	0.87[EUR][1000 genomes]
rs6050611	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6050617	0.88[EUR][1000 genomes]
rs6050626	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6050629	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6050630	0.80[AMR][1000 genomes];0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6050631	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6050632	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6076345	0.84[EUR][1000 genomes]
rs6076346	0.85[EUR][1000 genomes]
rs6083825	0.82[EUR][1000 genomes]
rs6083828	0.84[EUR][1000 genomes]
rs6083838	0.83[EUR][1000 genomes]
rs6083844	0.84[EUR][1000 genomes]
rs6083847	0.83[EUR][1000 genomes]
rs6083853	0.87[EUR][1000 genomes]
rs6083855	0.85[EUR][1000 genomes]
rs6083856	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6083862	0.87[EUR][1000 genomes]
rs6107044	0.88[EUR][1000 genomes]
rs6107045	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6107046	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6107047	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6115182	0.87[EUR][1000 genomes]
rs6115183	0.87[EUR][1000 genomes]
rs6115185	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6115191	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6115200	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6115204	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6115214	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6115215	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6115229	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6132833	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6132835	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6132848	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6138571	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6138572	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6138575	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6138588	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6138600	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6138609	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs6515651	0.91[EUR][1000 genomes]
rs7270835	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs761025	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs8113919	0.88[EUR][1000 genomes]
rs8123949	0.84[EUR][1000 genomes]
rs84816	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs928121	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:17 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1067379	chr20:25355484-25593240	Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	24 gene(s)	inside rSNPs	diseases
2	nsv1060591	chr20:25388781-25628750	ZNF genes & repeats Active TSS Weak transcription Enhancers Flanking Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
3	nsv544223	chr20:25388781-25628750	ZNF genes & repeats Strong transcription Enhancers Weak transcription Flanking Active TSS Genic enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
4	nsv1067441	chr20:25397566-25615439	Weak transcription Enhancers Active TSS ZNF genes & repeats Strong transcription Genic enhancers Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
5	nsv912828	chr20:25433015-25595175	Weak transcription Enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Flanking Active TSS Genic enhancers Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
6	nsv1062452	chr20:25438025-25590278	Weak transcription Active TSS Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
7	nsv1066066	chr20:25439367-25588016	Strong transcription Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
8	nsv544224	chr20:25439367-25588016	Genic enhancers ZNF genes & repeats Weak transcription Enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
9	nsv912829	chr20:25444242-25595175	Strong transcription Enhancers Weak transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
10	nsv912830	chr20:25449945-25595175	Weak transcription Strong transcription Flanking Active TSS Enhancers ZNF genes & repeats Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
11	nsv912831	chr20:25449945-25595868	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
12	nsv994976	chr20:25466406-25593286	Weak transcription Flanking Active TSS Enhancers Strong transcription Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
13	nsv534623	chr20:25466406-25593296	Weak transcription Enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
14	nsv1062765	chr20:25466482-25556751	Enhancers Flanking Active TSS Weak transcription Genic enhancers ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
15	nsv544225	chr20:25466482-25556751	Genic enhancers Weak transcription ZNF genes & repeats Enhancers Strong transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
16	esv2762069	chr20:25506582-25619528	Weak transcription Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
17	nsv912832	chr20:25527984-25595175	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	8 gene(s)	inside rSNPs	diseases

mRNA abundance (count:6)

SNP	Gene	Cis/trans	Tissue	Source
rs6107052	GINS1	Cis_1M	lymphoblastoid	RTeQTL
rs6107052	PYGB	cis	multi-tissue	Pritchard
rs6107052	ABHD12	cis	multi-tissue	Pritchard
rs6107052	NINL	cis	Thyroid	GTEx
rs6107052	ABHD12	Cis_1M	lymphoblastoid	RTeQTL
rs6107052	PYGB	cis	Whole Blood	GTEx

Chromatin state (count:81 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr20:25498200-25532200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr20:25517800-25554600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
3	chr20:25520000-25532000	Weak transcription	Dnd41	blood
4	chr20:25521400-25532200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr20:25521400-25534200	Weak transcription	Brain Inferior Temporal Lobe	brain
6	chr20:25521600-25565000	Weak transcription	Aorta	Aorta
7	chr20:25524400-25565000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
8	chr20:25524800-25531600	Enhancers	Fetal Lung	lung
9	chr20:25525000-25535400	Enhancers	Fetal Heart	heart
10	chr20:25526200-25534400	Weak transcription	Brain Substantia Nigra	brain
11	chr20:25526400-25543600	Weak transcription	Fetal Brain Female	brain
12	chr20:25526600-25534200	Weak transcription	Brain Hippocampus Middle	brain
13	chr20:25526600-25540200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
14	chr20:25527800-25532200	Weak transcription	HUES48 Cell Line	embryonic stem cell
15	chr20:25528200-25531200	Weak transcription	H9 Cell Line	embryonic stem cell
16	chr20:25528600-25531200	Enhancers	Esophagus	oesophagus
17	chr20:25528800-25531000	Enhancers	Gastric	stomach
18	chr20:25528800-25531000	Enhancers	Spleen	Spleen
19	chr20:25528800-25531200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
20	chr20:25529000-25531000	Enhancers	Lung	lung
21	chr20:25529000-25531200	Enhancers	Stomach Mucosa	stomach
22	chr20:25529000-25532600	Enhancers	Fetal Intestine Large	intestine
23	chr20:25529000-25535600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
24	chr20:25529200-25531000	Enhancers	Hela-S3	cervix
25	chr20:25529200-25531200	Enhancers	Ovary	ovary
26	chr20:25529200-25531400	Enhancers	Fetal Intestine Small	intestine
27	chr20:25529400-25531200	Enhancers	Breast Myoepithelial Primary Cells	Breast
28	chr20:25529400-25531400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
29	chr20:25529600-25533800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
30	chr20:25529600-25534200	Weak transcription	Thymus	Thymus
31	chr20:25529800-25531000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
32	chr20:25529800-25531000	Enhancers	NHLF	lung
33	chr20:25529800-25531200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
34	chr20:25529800-25531200	Enhancers	Fetal Muscle Trunk	muscle
35	chr20:25529800-25531200	Enhancers	Fetal Muscle Leg	muscle
36	chr20:25529800-25533000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
37	chr20:25530000-25531000	Flanking Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
38	chr20:25530000-25531000	Enhancers	Liver	Liver
39	chr20:25530000-25531000	Enhancers	Osteobl	bone
40	chr20:25530000-25531200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
41	chr20:25530000-25531200	Enhancers	Duodenum Smooth Muscle	Duodenum
42	chr20:25530000-25531600	Enhancers	Right Atrium	heart
43	chr20:25530000-25531600	Enhancers	Stomach Smooth Muscle	stomach
44	chr20:25530000-25532800	Enhancers	H1 Cell Line	embryonic stem cell
45	chr20:25530000-25532800	Enhancers	HUES6 Cell Line	embryonic stem cell
46	chr20:25530200-25531000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
47	chr20:25530200-25531200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
48	chr20:25530200-25531200	Enhancers	HUES64 Cell Line	embryonic stem cell
49	chr20:25530200-25531200	Enhancers	Brain Germinal Matrix	brain
50	chr20:25530200-25531200	Flanking Active TSS	Colon Smooth Muscle	Colon

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links