Variant report

Variant	rs61110592
Chromosome Location	chr8:63003844-63003845
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 90 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:87)

rs_ID	r²[population]
rs10429390	0.89[AFR][1000 genomes];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10504342	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs10504343	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs11783344	0.82[AFR][1000 genomes];0.89[AMR][1000 genomes];0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs16928158	0.84[AMR][1000 genomes]
rs16928256	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs16928258	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs16928263	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs16928265	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs16928270	0.80[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs16928290	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs16928293	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs16928294	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs16928311	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs16928313	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs16928321	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs16928323	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs16928335	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs16928339	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs16928355	0.83[AFR][1000 genomes];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs16928361	0.89[AFR][1000 genomes];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2882580	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs55897381	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs56713214	0.91[EUR][1000 genomes]
rs56718356	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs56994025	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs57344798	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs57558807	0.86[EUR][1000 genomes]
rs58744393	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs58847321	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs59171191	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs59442402	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs59830726	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs59883965	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs60055232	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs60575261	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs60821971	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs60927504	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs61273498	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs61345014	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs61400215	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs62507421	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs62507422	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs62507423	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs62507424	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs62507425	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs62507431	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs62507433	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs62507435	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs62507436	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs62507437	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs62507438	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs62507439	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs62508481	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs62508482	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs62508484	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs62508487	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs62508494	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs62508495	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs62508496	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs62508501	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs62508502	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs62508507	0.83[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs62508508	0.83[AFR][1000 genomes];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs62508510	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs62508511	0.83[AFR][1000 genomes];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs62508551	0.91[AFR][1000 genomes];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs62508559	0.89[AFR][1000 genomes];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs6983592	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6990858	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6991146	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6991767	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6994588	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6994900	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6995761	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs7011407	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7015631	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs7015943	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs7016381	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs72664028	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs72664033	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs72664035	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs72664036	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs73682684	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs73682686	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs73682687	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs73682688	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv890954	chr8:62919691-63023132	Enhancers Flanking Active TSS Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv890955	chr8:62919691-63062581	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv1032321	chr8:62954064-63026567	Enhancers Weak transcription ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:63002600-63004400	Enhancers	iPS-20b Cell Line	embryonic stem cell

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