Variant report

Variant rs6114680
Chromosome Location chr20:24360201-24360202
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:24357600-24360400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr20:24357800-24362800 Weak transcription Primary hematopoietic stem cells blood
3 chr20:24358000-24362400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
4 chr20:24358000-24362800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
5 chr20:24359000-24363200 Enhancers Brain Germinal Matrix brain
6 chr20:24359400-24360600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr20:24359400-24360600 Enhancers Primary hematopoietic stem cells short term culture blood
8 chr20:24359400-24360600 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
9 chr20:24359400-24360600 Enhancers Fetal Lung lung
10 chr20:24359400-24360600 Enhancers Fetal Muscle Trunk muscle
11 chr20:24359400-24360600 Enhancers NH-A brain
12 chr20:24359400-24361600 Enhancers Fetal Muscle Leg muscle
13 chr20:24359600-24360600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr20:24359800-24360600 Enhancers HUES6 Cell Line embryonic stem cell
15 chr20:24359800-24360600 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr20:24359800-24360600 Enhancers Colon Smooth Muscle Colon
17 chr20:24359800-24360600 Enhancers Rectal Smooth Muscle rectum
18 chr20:24359800-24360600 Enhancers Small Intestine intestine
19 chr20:24359800-24361000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr20:24359800-24363800 Enhancers Brain Hippocampus Middle brain
21 chr20:24359800-24364000 Enhancers Brain Substantia Nigra brain
22 chr20:24360000-24360400 Flanking Active TSS Brain Angular Gyrus brain
23 chr20:24360000-24360400 Flanking Active TSS Brain Cingulate Gyrus brain
24 chr20:24360000-24360400 Flanking Active TSS Brain Inferior Temporal Lobe brain
25 chr20:24360000-24360400 Enhancers Stomach Smooth Muscle stomach
26 chr20:24360000-24360400 Bivalent Enhancer A549 lung
27 chr20:24360000-24360400 Enhancers NHLF lung
28 chr20:24360000-24360600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
29 chr20:24360000-24360600 Enhancers HUES48 Cell Line embryonic stem cell
30 chr20:24360000-24360600 Enhancers Muscle Satellite Cultured Cells --
31 chr20:24360000-24360600 Enhancers Osteobl bone
32 chr20:24360000-24361200 Enhancers Fetal Stomach stomach
33 chr20:24360000-24361400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
34 chr20:24360000-24362000 Weak transcription Fetal Brain Male brain
35 chr20:24360200-24360400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr20:24360200-24360800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr20:24360200-24360800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr20:24360200-24360800 Enhancers Brain Anterior Caudate brain

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