The 2.0 version of rSNPBase

Variant report

Variant rs61195656
Chromosome Location chr1:220975114-220975115
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:220961000-220976800 Weak transcription Ovary ovary
2 chr1:220961000-220978200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr1:220961000-220982200 Weak transcription Brain Substantia Nigra brain
4 chr1:220961400-220983800 Weak transcription Esophagus oesophagus
5 chr1:220961600-220975200 Weak transcription Brain Cingulate Gyrus brain
6 chr1:220961600-220983600 Weak transcription Pancreas Pancrea
7 chr1:220961800-220979800 Weak transcription Right Atrium heart
8 chr1:220961800-220981400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
9 chr1:220961800-220981600 Weak transcription Fetal Muscle Trunk muscle
10 chr1:220961800-220983800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr1:220964800-220978400 Weak transcription Primary B cells from cord blood blood
12 chr1:220965000-220980000 Weak transcription Fetal Muscle Leg muscle
13 chr1:220965200-220979600 Weak transcription Gastric stomach
14 chr1:220965200-220985400 Weak transcription Aorta Aorta
15 chr1:220965400-220982200 Weak transcription Brain Inferior Temporal Lobe brain
16 chr1:220965600-220983600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr1:220965800-220983800 Weak transcription Fetal Lung lung
18 chr1:220966400-220996000 Strong transcription Monocytes-CD14+_RO01746 blood
19 chr1:220966600-220982400 Strong transcription Primary monocytes fromperipheralblood blood
20 chr1:220966800-220985200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
21 chr1:220967600-220976400 Strong transcription Adipose Nuclei Adipose
22 chr1:220967600-220983800 Weak transcription Psoas Muscle Psoas
23 chr1:220968200-220977200 Strong transcription Primary neutrophils fromperipheralblood blood
24 chr1:220969600-220975600 Strong transcription HUES48 Cell Line embryonic stem cell
25 chr1:220969600-220978800 Strong transcription HepG2 liver
26 chr1:220969800-220976400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
27 chr1:220969800-220976600 Strong transcription iPS-20b Cell Line embryonic stem cell
28 chr1:220970000-220975600 Strong transcription Breast Myoepithelial Primary Cells Breast
29 chr1:220970000-220975600 Strong transcription Fetal Intestine Large intestine
30 chr1:220970000-220976000 Strong transcription Fetal Stomach stomach
31 chr1:220970400-220981600 Weak transcription ES-I3 Cell Line embryonic stem cell
32 chr1:220970400-220985800 Weak transcription Duodenum Mucosa Duodenum
33 chr1:220970600-220975200 Strong transcription Liver Liver
34 chr1:220970600-220976400 Strong transcription Fetal Brain Female brain
35 chr1:220970800-220981600 Weak transcription Brain Hippocampus Middle brain
36 chr1:220971000-220975600 Strong transcription HUES6 Cell Line embryonic stem cell
37 chr1:220971000-220976400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr1:220971200-220976400 Strong transcription Spleen Spleen
39 chr1:220971200-220986400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
40 chr1:220971200-220991400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
41 chr1:220971600-220975200 Strong transcription Brain Germinal Matrix brain
42 chr1:220971600-220976200 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
43 chr1:220971600-220980600 Strong transcription Fetal Intestine Small intestine
44 chr1:220971800-220975600 Strong transcription Skeletal Muscle Male skeletal muscle
45 chr1:220972000-220976000 Strong transcription Cortex derived primary cultured neurospheres brain
46 chr1:220972200-220975600 Weak transcription Colon Smooth Muscle Colon
47 chr1:220972200-220976800 Weak transcription Hela-S3 cervix
48 chr1:220972200-220983800 Weak transcription Rectal Mucosa Donor 31 rectum
49 chr1:220972200-220984000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr1:220972800-220977800 Weak transcription iPS-18 Cell Line embryonic stem cell

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Last update: Aug 31, 2015