The 2.0 version of rSNPBase

Variant report

Variant rs61346484
Chromosome Location chr1:215778737-215778738
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:215741800-215786200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:215741800-215809800 Weak transcription Colonic Mucosa Colon
3 chr1:215742000-215786400 Weak transcription Thymus Thymus
4 chr1:215742200-215786400 Weak transcription Primary T cells from cord blood blood
5 chr1:215743200-215785800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr1:215750000-215786200 Weak transcription Small Intestine intestine
7 chr1:215750000-215805000 Weak transcription Lung lung
8 chr1:215750200-215785800 Weak transcription H9 Cell Line embryonic stem cell
9 chr1:215750200-215786200 Weak transcription Pancreas Pancrea
10 chr1:215750200-215790400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
11 chr1:215750200-215795400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr1:215750200-215796000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr1:215750200-215804400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr1:215750200-215809200 Weak transcription Gastric stomach
15 chr1:215752800-215781400 Weak transcription Hela-S3 cervix
16 chr1:215753200-215792200 Weak transcription Aorta Aorta
17 chr1:215755800-215804800 Weak transcription ES-WA7 Cell Line embryonic stem cell
18 chr1:215757000-215782600 Weak transcription Skeletal Muscle Male skeletal muscle
19 chr1:215758600-215781000 Weak transcription Dnd41 blood
20 chr1:215760400-215786200 Weak transcription Stomach Smooth Muscle stomach
21 chr1:215765200-215790400 Weak transcription Esophagus oesophagus
22 chr1:215766400-215786200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr1:215768000-215791800 Weak transcription Fetal Brain Male brain
24 chr1:215768400-215781000 Weak transcription Fetal Kidney kidney
25 chr1:215768400-215790600 Weak transcription Right Ventricle heart
26 chr1:215769000-215781000 Weak transcription NHEK skin
27 chr1:215770200-215781400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr1:215770600-215785000 Weak transcription Fetal Brain Female brain
29 chr1:215771200-215779000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
30 chr1:215771200-215781400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr1:215771200-215782000 Weak transcription Skeletal Muscle Female skeletal muscle
32 chr1:215771200-215786200 Weak transcription HSMMtube muscle
33 chr1:215773000-215790400 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr1:215773200-215779800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
35 chr1:215773200-215781800 Weak transcription Brain Germinal Matrix brain
36 chr1:215773200-215782000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
37 chr1:215773200-215782600 Weak transcription Brain Inferior Temporal Lobe brain
38 chr1:215773200-215785800 Weak transcription Primary B cells from cord blood blood
39 chr1:215773400-215781400 Weak transcription Cortex derived primary cultured neurospheres brain
40 chr1:215773400-215786200 Weak transcription Placenta Amnion Placenta Amnion
41 chr1:215773600-215785400 Weak transcription Brain Anterior Caudate brain
42 chr1:215773600-215786200 Weak transcription Fetal Intestine Small intestine
43 chr1:215773600-215792400 Weak transcription Brain Angular Gyrus brain
44 chr1:215773800-215778800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
45 chr1:215773800-215778800 Strong transcription Fetal Lung lung
46 chr1:215773800-215780200 Weak transcription Pancreatic Islets Pancreatic Islet
47 chr1:215773800-215798600 Weak transcription ES-I3 Cell Line embryonic stem cell
48 chr1:215774000-215781000 Weak transcription Brain Cingulate Gyrus brain
49 chr1:215774000-215781400 Weak transcription H1 Cell Line embryonic stem cell
50 chr1:215774000-215785400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015