Variant report

Variant rs61750871
Chromosome Location chr19:42572987-42572988
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:42553800-42573200 Weak transcription Pancreas Pancrea
2 chr19:42553800-42573200 Weak transcription Right Atrium heart
3 chr19:42557800-42579200 Weak transcription Gastric stomach
4 chr19:42570000-42573800 Flanking Active TSS Brain Germinal Matrix brain
5 chr19:42570600-42573600 Flanking Active TSS Fetal Brain Female brain
6 chr19:42571600-42574600 Active TSS Brain Anterior Caudate brain
7 chr19:42571800-42573400 Bivalent/Poised TSS Brain Cingulate Gyrus brain
8 chr19:42571800-42574400 Active TSS iPS-15b Cell Line embryonic stem cell
9 chr19:42572000-42573600 Flanking Active TSS iPS DF 19.11 Cell Line embryonic stem cell
10 chr19:42572000-42575000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr19:42572200-42573400 Flanking Active TSS Stomach Smooth Muscle stomach
12 chr19:42572200-42573400 Enhancers Spleen Spleen
13 chr19:42572200-42573600 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
14 chr19:42572200-42574600 Active TSS H9 Cell Line embryonic stem cell
15 chr19:42572200-42574600 Active TSS Brain Dorsolateral Prefrontal Cortex brain
16 chr19:42572200-42574800 Active TSS HUES64 Cell Line embryonic stem cell
17 chr19:42572200-42574800 Active TSS Brain Angular Gyrus brain
18 chr19:42572400-42573000 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
19 chr19:42572400-42573000 Bivalent Enhancer Fetal Muscle Trunk muscle
20 chr19:42572400-42573200 Flanking Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr19:42572400-42573200 Flanking Bivalent TSS/Enh HUES6 Cell Line embryonic stem cell
22 chr19:42572400-42573400 Flanking Active TSS ES-UCSF4 Cell Line embryonic stem cell
23 chr19:42572400-42573400 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
24 chr19:42572400-42573400 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
25 chr19:42572400-42573400 Flanking Active TSS Cortex derived primary cultured neurospheres brain
26 chr19:42572400-42573600 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
27 chr19:42572400-42574600 Active TSS Rectal Smooth Muscle rectum
28 chr19:42572400-42575000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr19:42572600-42573000 Active TSS H1 Cell Line embryonic stem cell
30 chr19:42572600-42573000 Flanking Active TSS HUES48 Cell Line embryonic stem cell
31 chr19:42572600-42573000 Flanking Bivalent TSS/Enh iPS-20b Cell Line embryonic stem cell
32 chr19:42572600-42573000 Bivalent/Poised TSS Brain Inferior Temporal Lobe brain
33 chr19:42572600-42573400 Active TSS ES-WA7 Cell Line embryonic stem cell
34 chr19:42572600-42573400 Flanking Active TSS Primary hematopoietic stem cells blood
35 chr19:42572600-42573400 Flanking Active TSS Fetal Brain Male brain
36 chr19:42572600-42574200 Bivalent Enhancer Primary T cells fromperipheralblood blood
37 chr19:42572600-42574200 Bivalent/Poised TSS Colonic Mucosa Colon
38 chr19:42572600-42574600 Active TSS Fetal Kidney kidney
39 chr19:42572600-42574600 Active TSS Pancreatic Islets Pancreatic Islet
40 chr19:42572800-42573000 Flanking Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr19:42572800-42573000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
42 chr19:42572800-42573000 Flanking Active TSS Brain Substantia Nigra brain
43 chr19:42572800-42573000 Flanking Active TSS Duodenum Smooth Muscle Duodenum
44 chr19:42572800-42573400 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr19:42572800-42573400 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr19:42572800-42573400 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin02 Skin
47 chr19:42572800-42573400 Bivalent Enhancer Fetal Heart heart
48 chr19:42572800-42573400 Bivalent/Poised TSS Rectal Mucosa Donor 29 rectum
49 chr19:42572800-42573600 Bivalent/Poised TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr19:42572800-42573600 Flanking Bivalent TSS/Enh Fetal Muscle Leg muscle

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