The 2.0 version of rSNPBase

Variant report

Variant rs61753870
Chromosome Location chr4:56885581-56885582
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:56816200-56887800 Weak transcription Gastric stomach
2 chr4:56816400-56890800 Weak transcription Colon Smooth Muscle Colon
3 chr4:56816600-56890600 Weak transcription Brain Hippocampus Middle brain
4 chr4:56816600-56896400 Weak transcription Fetal Heart heart
5 chr4:56819000-56897400 Weak transcription HSMMtube muscle
6 chr4:56819200-56890600 Weak transcription NHLF lung
7 chr4:56820600-56892400 Weak transcription Hela-S3 cervix
8 chr4:56823600-56893800 Weak transcription HMEC breast
9 chr4:56829600-56890600 Weak transcription A549 lung
10 chr4:56835400-56904800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr4:56837200-56905000 Weak transcription Brain Substantia Nigra brain
12 chr4:56839800-56896600 Weak transcription Brain Angular Gyrus brain
13 chr4:56842800-56890800 Weak transcription Osteobl bone
14 chr4:56844200-56891000 Weak transcription Colonic Mucosa Colon
15 chr4:56847200-56891000 Weak transcription Right Ventricle heart
16 chr4:56852600-56890600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr4:56856200-56892600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
18 chr4:56856400-56889200 Strong transcription Primary monocytes fromperipheralblood blood
19 chr4:56857600-56897400 Strong transcription Fetal Thymus thymus
20 chr4:56857600-56898200 Strong transcription Dnd41 blood
21 chr4:56857600-56898200 Strong transcription Monocytes-CD14+_RO01746 blood
22 chr4:56858200-56889200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr4:56859600-56889200 Strong transcription Primary T cells from cord blood blood
24 chr4:56861200-56889400 Strong transcription Primary T helper cells fromperipheralblood blood
25 chr4:56863200-56892600 Weak transcription ES-WA7 Cell Line embryonic stem cell
26 chr4:56864600-56894200 Weak transcription iPS-15b Cell Line embryonic stem cell
27 chr4:56864800-56892200 Weak transcription ES-I3 Cell Line embryonic stem cell
28 chr4:56865400-56894400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
29 chr4:56866200-56895000 Weak transcription Lung lung
30 chr4:56866800-56890600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr4:56866800-56890600 Weak transcription Skeletal Muscle Female skeletal muscle
32 chr4:56866800-56891000 Weak transcription Esophagus oesophagus
33 chr4:56866800-56896000 Weak transcription Small Intestine intestine
34 chr4:56867000-56895000 Weak transcription Psoas Muscle Psoas
35 chr4:56867200-56892200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
36 chr4:56868600-56886000 Weak transcription Brain Germinal Matrix brain
37 chr4:56869000-56891200 Weak transcription Fetal Brain Male brain
38 chr4:56869400-56886400 Strong transcription Thymus Thymus
39 chr4:56872200-56889400 Strong transcription Primary T cells fromperipheralblood blood
40 chr4:56872200-56893200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr4:56872200-56904800 Weak transcription HepG2 liver
42 chr4:56872600-56886200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
43 chr4:56873400-56897000 Strong transcription Primary T regulatory cells fromperipheralblood blood
44 chr4:56874400-56887800 Strong transcription iPS-20b Cell Line embryonic stem cell
45 chr4:56874800-56890600 Weak transcription Primary T killer memory cells from peripheral blood blood
46 chr4:56875200-56886000 Weak transcription Brain Inferior Temporal Lobe brain
47 chr4:56875400-56889800 Strong transcription Primary B cells from cord blood blood
48 chr4:56875600-56887600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr4:56876000-56886600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
50 chr4:56876400-56887800 Strong transcription Duodenum Mucosa Duodenum

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Last update: Aug 31, 2015