Variant report

Variant	rs61817047
Chromosome Location	chr1:216887443-216887444
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs17043436	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs17043466	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2066108	0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2789721	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2789722	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2813666	0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2813670	0.83[ASN][1000 genomes]
rs2813711	0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2820881	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2820882	0.83[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2999503	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs61817046	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:216868200-216894000	Weak transcription	Placenta	Placenta
2	chr1:216879400-216888400	Weak transcription	Gastric	stomach
3	chr1:216883600-216894600	Weak transcription	Skeletal Muscle Male	skeletal muscle
4	chr1:216884600-216891800	Weak transcription	Right Ventricle	heart
5	chr1:216884600-216895200	Weak transcription	Psoas Muscle	Psoas
6	chr1:216886200-216890400	Enhancers	Pancreatic Islets	Pancreatic Islet
7	chr1:216887400-216887600	Flanking Active TSS	Fetal Heart	heart
8	chr1:216887400-216888200	Weak transcription	Duodenum Mucosa	Duodenum
9	chr1:216887400-216896400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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