The 2.0 version of rSNPBase

Variant report

Variant rs61823581
Chromosome Location chr1:224010099-224010100
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:223960200-224025400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr1:223988200-224012000 Weak transcription Colon Smooth Muscle Colon
3 chr1:223991200-224010800 Weak transcription iPS-15b Cell Line embryonic stem cell
4 chr1:223999800-224010800 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr1:224001800-224010600 Weak transcription Primary T helper naive cells from peripheral blood blood
6 chr1:224001800-224010800 Weak transcription Primary T killer naive cells fromperipheralblood blood
7 chr1:224002000-224015000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr1:224002000-224023800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr1:224002200-224013000 Weak transcription H9 Cell Line embryonic stem cell
10 chr1:224002200-224020200 Weak transcription Placenta Placenta
11 chr1:224002200-224020200 Weak transcription Rectal Smooth Muscle rectum
12 chr1:224002400-224010800 Weak transcription Small Intestine intestine
13 chr1:224002400-224013600 Weak transcription Esophagus oesophagus
14 chr1:224003400-224013200 Weak transcription HepG2 liver
15 chr1:224003800-224013600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr1:224003800-224014800 Weak transcription Placenta Amnion Placenta Amnion
17 chr1:224004000-224010800 Weak transcription Stomach Mucosa stomach
18 chr1:224004000-224012000 Weak transcription Right Ventricle heart
19 chr1:224004200-224014800 Weak transcription HMEC breast
20 chr1:224004800-224010800 Weak transcription Gastric stomach
21 chr1:224007000-224024000 Weak transcription Fetal Intestine Small intestine
22 chr1:224007400-224015200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
23 chr1:224007800-224013400 Weak transcription Ovary ovary
24 chr1:224007800-224020200 Weak transcription Stomach Smooth Muscle stomach
25 chr1:224008000-224017000 Weak transcription Fetal Kidney kidney
26 chr1:224008000-224019800 Weak transcription Brain Germinal Matrix brain
27 chr1:224008200-224019400 Weak transcription Hela-S3 cervix
28 chr1:224008400-224011600 Enhancers HUES6 Cell Line embryonic stem cell
29 chr1:224008400-224011800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr1:224008600-224010800 Weak transcription Primary T killer memory cells from peripheral blood blood
31 chr1:224008600-224011000 Enhancers Muscle Satellite Cultured Cells --
32 chr1:224008600-224012400 Weak transcription Fetal Lung lung
33 chr1:224008600-224013400 Weak transcription Adipose Nuclei Adipose
34 chr1:224008600-224015000 Weak transcription ES-WA7 Cell Line embryonic stem cell
35 chr1:224008600-224019400 Weak transcription A549 lung
36 chr1:224008800-224010400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
37 chr1:224008800-224012600 Weak transcription ES-I3 Cell Line embryonic stem cell
38 chr1:224008800-224013600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
39 chr1:224008800-224020200 Weak transcription Fetal Muscle Trunk muscle
40 chr1:224009000-224010400 Weak transcription Primary T helper naive cells fromperipheralblood blood
41 chr1:224009000-224010600 Weak transcription HUES64 Cell Line embryonic stem cell
42 chr1:224009000-224010800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
43 chr1:224009000-224010800 Weak transcription Fetal Brain Female brain
44 chr1:224009000-224010800 Weak transcription Fetal Intestine Large intestine
45 chr1:224009000-224010800 Weak transcription Pancreas Pancrea
46 chr1:224009000-224010800 Weak transcription Spleen Spleen
47 chr1:224009000-224010800 Weak transcription NH-A brain
48 chr1:224009000-224012800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
49 chr1:224009000-224013000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
50 chr1:224009000-224013000 Weak transcription Primary Natural Killer cells fromperipheralblood blood

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Last update: Aug 31, 2015