The 2.0 version of rSNPBase

Variant report

Variant rs61823591
Chromosome Location chr1:224029248-224029249
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:224020600-224032400 Weak transcription Placenta Amnion Placenta Amnion
2 chr1:224020800-224031600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
3 chr1:224023000-224030600 Weak transcription Fetal Kidney kidney
4 chr1:224023200-224031600 Weak transcription Hela-S3 cervix
5 chr1:224024000-224031800 Weak transcription Brain Inferior Temporal Lobe brain
6 chr1:224024000-224031800 Weak transcription Thymus Thymus
7 chr1:224024200-224031600 Weak transcription Fetal Adrenal Gland Adrenal Gland
8 chr1:224024200-224031600 Weak transcription Rectal Mucosa Donor 29 rectum
9 chr1:224024200-224031600 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr1:224024200-224031800 Weak transcription Adipose Nuclei Adipose
11 chr1:224024400-224031800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
12 chr1:224024600-224029600 Weak transcription Pancreas Pancrea
13 chr1:224024600-224030800 Weak transcription Primary B cells from cord blood blood
14 chr1:224024600-224031600 Weak transcription Primary B cells from peripheral blood blood
15 chr1:224024600-224031800 Weak transcription Breast Myoepithelial Primary Cells Breast
16 chr1:224024600-224031800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr1:224024600-224031800 Weak transcription Brain Cingulate Gyrus brain
18 chr1:224024600-224031800 Weak transcription Esophagus oesophagus
19 chr1:224025200-224030000 Weak transcription H9 Cell Line embryonic stem cell
20 chr1:224025200-224030600 Weak transcription NHEK skin
21 chr1:224025200-224031800 Weak transcription Rectal Smooth Muscle rectum
22 chr1:224025400-224029400 Weak transcription Primary T regulatory cells fromperipheralblood blood
23 chr1:224025600-224032200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
24 chr1:224025800-224029600 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr1:224025800-224029800 Weak transcription Fetal Brain Male brain
26 chr1:224026000-224030000 Weak transcription Duodenum Mucosa Duodenum
27 chr1:224026000-224031600 Weak transcription Fetal Intestine Small intestine
28 chr1:224026200-224030000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr1:224026200-224031800 Weak transcription Colon Smooth Muscle Colon
30 chr1:224026400-224029400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
31 chr1:224026400-224029800 Weak transcription Brain Angular Gyrus brain
32 chr1:224026400-224030000 Weak transcription Primary monocytes fromperipheralblood blood
33 chr1:224026400-224030000 Weak transcription Primary T cells fromperipheralblood blood
34 chr1:224026400-224030000 Enhancers Primary T helper cells PMA-I stimulated --
35 chr1:224026400-224030000 Weak transcription Small Intestine intestine
36 chr1:224026400-224030400 Weak transcription Primary T cells from cord blood blood
37 chr1:224026400-224030600 Weak transcription HepG2 liver
38 chr1:224026400-224030600 Weak transcription HUVEC blood vessel
39 chr1:224026400-224031600 Weak transcription Primary neutrophils fromperipheralblood blood
40 chr1:224026400-224031600 Weak transcription Primary hematopoietic stem cells short term culture blood
41 chr1:224026400-224031600 Weak transcription Fetal Intestine Large intestine
42 chr1:224026400-224031600 Weak transcription Right Atrium heart
43 chr1:224026400-224031600 Weak transcription Stomach Mucosa stomach
44 chr1:224026400-224031800 Weak transcription H1 Cell Line embryonic stem cell
45 chr1:224026400-224031800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr1:224026400-224031800 Weak transcription Brain Hippocampus Middle brain
47 chr1:224026400-224031800 Weak transcription Fetal Thymus thymus
48 chr1:224026400-224031800 Weak transcription Gastric stomach
49 chr1:224026400-224031800 Weak transcription Stomach Smooth Muscle stomach
50 chr1:224026400-224032400 Weak transcription Lung lung

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Last update: Aug 31, 2015