Variant report

Variant	rs61826364
Chromosome Location	chr1:179522227-179522228
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:179521857..179523808-chr1:179524455..179526910,2	K562	blood:

Extended variants
information (count: 74 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:74)

rs_ID	r²[population]
rs10753200	0.81[EUR][1000 genomes]
rs10913755	0.86[ASN][1000 genomes]
rs10913760	0.86[ASN][1000 genomes]
rs10913761	0.86[ASN][1000 genomes]
rs10913762	0.86[ASN][1000 genomes]
rs10913766	0.86[ASN][1000 genomes]
rs10913767	0.86[ASN][1000 genomes]
rs10913768	0.86[ASN][1000 genomes]
rs10913769	0.86[ASN][1000 genomes]
rs10913770	0.86[ASN][1000 genomes]
rs10913771	0.86[ASN][1000 genomes]
rs10913809	1.00[ASN][1000 genomes]
rs11577579	0.86[ASN][1000 genomes]
rs11578241	0.86[ASN][1000 genomes]
rs11582158	1.00[ASN][1000 genomes]
rs11582255	0.86[ASN][1000 genomes]
rs11582293	0.86[ASN][1000 genomes]
rs11582754	0.86[ASN][1000 genomes]
rs11586744	0.80[ASN][1000 genomes]
rs11802624	0.86[ASN][1000 genomes]
rs11802625	0.86[ASN][1000 genomes]
rs11802637	0.86[ASN][1000 genomes]
rs12401957	0.86[ASN][1000 genomes]
rs12403885	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12406197	0.96[EUR][1000 genomes]
rs12408443	0.80[ASN][1000 genomes]
rs12409337	0.80[ASN][1000 genomes]
rs12722736	0.86[ASN][1000 genomes]
rs12724496	0.86[ASN][1000 genomes]
rs12724634	0.86[ASN][1000 genomes]
rs12724901	1.00[ASN][1000 genomes]
rs12729067	0.86[ASN][1000 genomes]
rs12729775	0.86[ASN][1000 genomes]
rs12736279	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12736545	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12738929	0.86[ASN][1000 genomes]
rs12739116	0.86[ASN][1000 genomes]
rs12744251	0.86[ASN][1000 genomes]
rs12750591	0.86[ASN][1000 genomes]
rs12757935	0.80[ASN][1000 genomes]
rs12758415	0.80[ASN][1000 genomes]
rs1328597	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1328598	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1410589	0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1576224	0.93[ASN][1000 genomes]
rs1590783	0.80[EUR][1000 genomes]
rs1887815	0.91[EUR][1000 genomes]
rs2209919	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34291276	1.00[ASN][1000 genomes]
rs34463289	1.00[ASN][1000 genomes]
rs35401719	1.00[ASN][1000 genomes]
rs35427395	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36057553	0.87[AFR][1000 genomes];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs3754133	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs3765548	0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs3930537	0.87[EUR][1000 genomes]
rs4130266	0.86[ASN][1000 genomes]
rs4360491	0.80[ASN][1000 genomes]
rs4418554	0.80[ASN][1000 genomes]
rs4454499	0.86[ASN][1000 genomes]
rs4651028	0.86[ASN][1000 genomes]
rs4651037	0.93[ASN][1000 genomes]
rs4652418	0.81[EUR][1000 genomes]
rs4652426	0.89[EUR][1000 genomes]
rs61821011	0.86[ASN][1000 genomes]
rs61826365	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61826402	0.89[EUR][1000 genomes]
rs7513782	0.80[ASN][1000 genomes]
rs7513973	0.80[ASN][1000 genomes]
rs7532155	0.86[ASN][1000 genomes]
rs7551894	0.80[ASN][1000 genomes]
rs7554103	0.80[ASN][1000 genomes]
rs9662026	0.80[ASN][1000 genomes]
rs9699789	1.00[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:179522000-179523600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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