The 2.0 version of rSNPBase

Variant report

Variant rs61848984
Chromosome Location chr1:211550620-211550621
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:211510600-211555400 Weak transcription Skeletal Muscle Male skeletal muscle
2 chr1:211514800-211552200 Weak transcription Skeletal Muscle Female skeletal muscle
3 chr1:211515000-211555000 Weak transcription Hela-S3 cervix
4 chr1:211515000-211555800 Weak transcription Esophagus oesophagus
5 chr1:211521600-211555200 Weak transcription Pancreatic Islets Pancreatic Islet
6 chr1:211525000-211555600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
7 chr1:211525400-211555000 Weak transcription Fetal Lung lung
8 chr1:211526600-211555400 Weak transcription Cortex derived primary cultured neurospheres brain
9 chr1:211526800-211550800 Weak transcription Small Intestine intestine
10 chr1:211528000-211551400 Strong transcription Primary B cells from peripheral blood blood
11 chr1:211528800-211554600 Weak transcription Psoas Muscle Psoas
12 chr1:211529600-211551200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
13 chr1:211530200-211555800 Weak transcription Pancreas Pancrea
14 chr1:211530400-211555200 Weak transcription Brain Anterior Caudate brain
15 chr1:211530600-211555600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr1:211531000-211551600 Weak transcription NHLF lung
17 chr1:211533400-211551200 Strong transcription Primary T cells fromperipheralblood blood
18 chr1:211533400-211552000 Weak transcription Muscle Satellite Cultured Cells --
19 chr1:211533800-211554800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
20 chr1:211534600-211555800 Weak transcription Gastric stomach
21 chr1:211535000-211555000 Weak transcription A549 lung
22 chr1:211535400-211555800 Weak transcription Left Ventricle heart
23 chr1:211537200-211551200 Strong transcription Primary T helper cells PMA-I stimulated --
24 chr1:211539800-211555400 Weak transcription Primary T killer naive cells fromperipheralblood blood
25 chr1:211540800-211555400 Weak transcription Colon Smooth Muscle Colon
26 chr1:211543200-211555800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr1:211544200-211555600 Weak transcription Colonic Mucosa Colon
28 chr1:211544600-211552800 Strong transcription Primary T cells from cord blood blood
29 chr1:211545400-211555400 Weak transcription HUVEC blood vessel
30 chr1:211545800-211555200 Weak transcription Duodenum Mucosa Duodenum
31 chr1:211546000-211555000 Weak transcription Brain Cingulate Gyrus brain
32 chr1:211546200-211555400 Weak transcription Rectal Mucosa Donor 31 rectum
33 chr1:211547200-211551600 Strong transcription Primary B cells from cord blood blood
34 chr1:211547800-211555600 Weak transcription Fetal Intestine Large intestine
35 chr1:211548000-211555600 Weak transcription Primary T killer memory cells from peripheral blood blood
36 chr1:211548000-211555600 Weak transcription Ovary ovary
37 chr1:211548200-211555400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
38 chr1:211548200-211555400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
39 chr1:211548200-211555400 Weak transcription Right Atrium heart
40 chr1:211548400-211551600 Enhancers Breast Myoepithelial Primary Cells Breast
41 chr1:211548800-211550800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
42 chr1:211549000-211555400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr1:211549200-211555200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
44 chr1:211549200-211555400 Weak transcription Rectal Smooth Muscle rectum
45 chr1:211549200-211555400 Weak transcription Stomach Mucosa stomach
46 chr1:211549200-211555800 Weak transcription Spleen Spleen
47 chr1:211549400-211555200 Weak transcription Primary T helper naive cells from peripheral blood blood
48 chr1:211549600-211555800 Weak transcription Lung lung
49 chr1:211549800-211550800 Enhancers iPS-15b Cell Line embryonic stem cell
50 chr1:211549800-211551600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --

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Last update: Aug 31, 2015