The 2.0 version of rSNPBase

Variant report

Variant rs61879698
Chromosome Location chr11:17123571-17123572
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:17100400-17157200 Weak transcription Fetal Heart heart
2 chr11:17100600-17124200 Weak transcription Fetal Brain Male brain
3 chr11:17101600-17145000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr11:17105400-17172800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr11:17106800-17156600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr11:17107000-17167200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
7 chr11:17107800-17147200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
8 chr11:17108200-17141400 Strong transcription Liver Liver
9 chr11:17108200-17177400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr11:17108600-17172800 Weak transcription Pancreatic Islets Pancreatic Islet
11 chr11:17108800-17126800 Strong transcription Osteobl bone
12 chr11:17109200-17144600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr11:17109400-17128600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
14 chr11:17109400-17132600 Strong transcription Fetal Adrenal Gland Adrenal Gland
15 chr11:17109400-17148400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr11:17109600-17127600 Strong transcription iPS-18 Cell Line embryonic stem cell
17 chr11:17109600-17147000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr11:17109800-17158400 Strong transcription HUES64 Cell Line embryonic stem cell
19 chr11:17110000-17128200 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
20 chr11:17110000-17128400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr11:17110200-17132800 Strong transcription Fetal Intestine Large intestine
22 chr11:17110200-17136400 Strong transcription Primary T cells fromperipheralblood blood
23 chr11:17111000-17125400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
24 chr11:17111600-17124400 Strong transcription Fetal Intestine Small intestine
25 chr11:17111600-17182000 Weak transcription Primary T killer memory cells from peripheral blood blood
26 chr11:17111800-17157800 Weak transcription iPS-15b Cell Line embryonic stem cell
27 chr11:17113200-17125600 Weak transcription Small Intestine intestine
28 chr11:17113600-17124000 Weak transcription K562 blood
29 chr11:17113600-17130000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
30 chr11:17113800-17124000 Weak transcription ES-WA7 Cell Line embryonic stem cell
31 chr11:17114000-17124200 Strong transcription HUVEC blood vessel
32 chr11:17114200-17124000 Weak transcription Primary T killer naive cells fromperipheralblood blood
33 chr11:17115800-17154400 Weak transcription Primary T helper naive cells from peripheral blood blood
34 chr11:17116600-17124000 Weak transcription Fetal Lung lung
35 chr11:17116800-17134800 Weak transcription NHLF lung
36 chr11:17116800-17149800 Weak transcription A549 lung
37 chr11:17117800-17126600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr11:17117800-17126800 Strong transcription HepG2 liver
39 chr11:17117800-17147000 Strong transcription HUES48 Cell Line embryonic stem cell
40 chr11:17117800-17151800 Strong transcription iPS-20b Cell Line embryonic stem cell
41 chr11:17118200-17125800 Strong transcription NHEK skin
42 chr11:17118200-17127400 Strong transcription Primary T cells from cord blood blood
43 chr11:17118200-17129000 Strong transcription Primary T helper cells PMA-I stimulated --
44 chr11:17118200-17135600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr11:17118200-17139400 Strong transcription Placenta Placenta
46 chr11:17118200-17141400 Strong transcription HUES6 Cell Line embryonic stem cell
47 chr11:17118400-17128400 Strong transcription Primary T helper cells fromperipheralblood blood
48 chr11:17118400-17139200 Strong transcription Primary B cells from peripheral blood blood
49 chr11:17118400-17146800 Strong transcription Breast Myoepithelial Primary Cells Breast
50 chr11:17118800-17124200 Weak transcription Colonic Mucosa Colon

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Last update: Aug 31, 2015