The 2.0 version of rSNPBase

Variant report

Variant rs61884297
Chromosome Location chr11:46705974-46705975
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:46667200-46717000 Strong transcription Brain Germinal Matrix brain
2 chr11:46689600-46706200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
3 chr11:46691600-46709200 Weak transcription HUVEC blood vessel
4 chr11:46697200-46716000 Weak transcription iPS-18 Cell Line embryonic stem cell
5 chr11:46697200-46721200 Weak transcription ES-I3 Cell Line embryonic stem cell
6 chr11:46697800-46706200 Strong transcription Rectal Smooth Muscle rectum
7 chr11:46697800-46709200 Strong transcription Fetal Stomach stomach
8 chr11:46698000-46708800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr11:46698000-46708800 Strong transcription Stomach Smooth Muscle stomach
10 chr11:46698000-46718600 Strong transcription Rectal Mucosa Donor 29 rectum
11 chr11:46698200-46706000 Strong transcription Fetal Lung lung
12 chr11:46698200-46706200 Strong transcription Dnd41 blood
13 chr11:46698200-46708600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr11:46698400-46709000 Weak transcription Fetal Kidney kidney
15 chr11:46698400-46719400 Strong transcription Sigmoid Colon Sigmoid Colon
16 chr11:46698600-46706600 Strong transcription Primary T regulatory cells fromperipheralblood blood
17 chr11:46698800-46706200 Strong transcription Fetal Thymus thymus
18 chr11:46699000-46706000 Strong transcription Cortex derived primary cultured neurospheres brain
19 chr11:46699000-46706000 Strong transcription Lung lung
20 chr11:46699200-46706000 Strong transcription Primary T helper 17 cells PMA-I stimulated --
21 chr11:46699200-46706000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr11:46699200-46706200 Strong transcription Primary T cells from cord blood blood
23 chr11:46699200-46706200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
24 chr11:46699200-46706200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr11:46699200-46706400 Strong transcription Primary B cells from cord blood blood
26 chr11:46699200-46715800 Strong transcription Primary T helper cells fromperipheralblood blood
27 chr11:46699200-46716400 Strong transcription Primary T helper cells PMA-I stimulated --
28 chr11:46699200-46717000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
29 chr11:46699200-46717200 Strong transcription Liver Liver
30 chr11:46699200-46719000 Strong transcription Primary B cells from peripheral blood blood
31 chr11:46699600-46706600 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
32 chr11:46699800-46706000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr11:46699800-46706400 Strong transcription Primary T helper naive cells fromperipheralblood blood
34 chr11:46699800-46715200 Strong transcription Fetal Muscle Leg muscle
35 chr11:46700000-46706200 Strong transcription Osteobl bone
36 chr11:46700400-46708400 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr11:46700400-46714000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr11:46700400-46718800 Strong transcription Primary neutrophils fromperipheralblood blood
39 chr11:46700600-46715400 Strong transcription Primary T cells fromperipheralblood blood
40 chr11:46700800-46706200 Strong transcription Primary monocytes fromperipheralblood blood
41 chr11:46701000-46706200 Strong transcription Monocytes-CD14+_RO01746 blood
42 chr11:46701000-46709000 Weak transcription GM12878-XiMat blood
43 chr11:46701400-46710600 Strong transcription Fetal Intestine Small intestine
44 chr11:46701800-46706400 Strong transcription Duodenum Mucosa Duodenum
45 chr11:46701800-46709000 Weak transcription HUES64 Cell Line embryonic stem cell
46 chr11:46701800-46715400 Weak transcription K562 blood
47 chr11:46701800-46718600 Strong transcription Fetal Intestine Large intestine
48 chr11:46702000-46708600 Weak transcription Psoas Muscle Psoas
49 chr11:46702000-46715800 Weak transcription H9 Cell Line embryonic stem cell
50 chr11:46702600-46707800 Weak transcription iPS-15b Cell Line embryonic stem cell

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Last update: Aug 31, 2015