The 2.0 version of rSNPBase

Variant report

Variant rs61896122
Chromosome Location chr11:47084871-47084872
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:47068400-47092400 Weak transcription Duodenum Mucosa Duodenum
2 chr11:47071600-47089000 Weak transcription Gastric stomach
3 chr11:47072600-47093000 Weak transcription Ovary ovary
4 chr11:47072800-47093000 Weak transcription Brain Hippocampus Middle brain
5 chr11:47073200-47092400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr11:47073600-47088600 Weak transcription Fetal Muscle Trunk muscle
7 chr11:47073800-47092200 Weak transcription Placenta Placenta
8 chr11:47073800-47100200 Weak transcription Thymus Thymus
9 chr11:47075200-47087400 Weak transcription Brain Cingulate Gyrus brain
10 chr11:47075200-47093400 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr11:47075800-47093400 Weak transcription Rectal Mucosa Donor 29 rectum
12 chr11:47077600-47085800 Weak transcription HepG2 liver
13 chr11:47077600-47113200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr11:47077800-47088200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr11:47078000-47097000 Weak transcription Aorta Aorta
16 chr11:47078200-47093200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr11:47078400-47092400 Weak transcription Small Intestine intestine
18 chr11:47078600-47092600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
19 chr11:47079400-47093000 Weak transcription Fetal Brain Male brain
20 chr11:47079800-47086600 Weak transcription Skeletal Muscle Female skeletal muscle
21 chr11:47080000-47092400 Weak transcription Fetal Intestine Small intestine
22 chr11:47080000-47092400 Weak transcription Fetal Stomach stomach
23 chr11:47080400-47090000 Weak transcription Breast Myoepithelial Primary Cells Breast
24 chr11:47080600-47093200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr11:47080800-47103000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr11:47081000-47092400 Weak transcription Fetal Intestine Large intestine
27 chr11:47081200-47089000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr11:47081400-47085200 Weak transcription Fetal Lung lung
29 chr11:47082800-47087400 Weak transcription Primary T cells from cord blood blood
30 chr11:47082800-47088200 Weak transcription NHDF-Ad bronchial
31 chr11:47083000-47085600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
32 chr11:47083000-47087800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr11:47083000-47088200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr11:47083000-47088400 Weak transcription NHLF lung
35 chr11:47083200-47088200 Weak transcription Muscle Satellite Cultured Cells --
36 chr11:47083200-47089000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
37 chr11:47083200-47093000 Weak transcription Brain Anterior Caudate brain
38 chr11:47083200-47093000 Weak transcription Brain Substantia Nigra brain
39 chr11:47083200-47100600 Weak transcription NH-A brain
40 chr11:47083400-47085000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
41 chr11:47083400-47089000 Weak transcription ES-WA7 Cell Line embryonic stem cell
42 chr11:47083400-47091600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
43 chr11:47083600-47088200 Weak transcription Hela-S3 cervix
44 chr11:47083600-47089000 Weak transcription K562 blood
45 chr11:47083600-47092800 Weak transcription A549 lung
46 chr11:47084000-47088400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr11:47084400-47088400 Weak transcription HUES64 Cell Line embryonic stem cell
48 chr11:47084400-47088400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr11:47084400-47090800 Weak transcription HUES48 Cell Line embryonic stem cell
50 chr11:47084600-47087800 Weak transcription ES-I3 Cell Line embryonic stem cell

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Last update: Aug 31, 2015