Variant report

Variant	rs61928642
Chromosome Location	chr12:11323516-11323517
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	PML	chr12:11323488-11324719	GM12878	blood:	n/a	n/a
2	SIN3AK20	chr12:11323503-11324508	MCF-7	breast:	n/a	n/a
3	POLR2A	chr12:11323441-11324595	GM12892	blood:	n/a	n/a
4	MAX	chr12:11323430-11324694	A549	lung:	n/a	n/a
5	POLR2A	chr12:11323488-11324440	HepG2	liver:	n/a	n/a
6	POLR2A	chr12:11323406-11324997	HepG2	liver:	n/a	n/a
7	TAF1	chr12:11323485-11324672	ECC-1	luminal epithelium:	n/a	n/a
8	TEAD4	chr12:11323515-11323863	HepG2	liver:	n/a	n/a
9	HA-E2F1	chr12:11323481-11324553	MCF-7	breast:	n/a	chr12:11323816-11323826 chr12:11324186-11324196
10	REST	chr12:11323254-11325495	H1-neurons	neurons:	n/a	chr12:11324075-11324088
11	POLR2A	chr12:11323504-11324474	GM12891	blood:	n/a	n/a
12	EP300	chr12:11323460-11324772	GM12878	blood:	n/a	chr12:11323807-11323823 chr12:11323935-11323944 chr12:11323512-11323526 chr12:11324224-11324240
13	POLR2A	chr12:11323441-11324929	GM12878	blood:	n/a	n/a
14	POLR2A	chr12:11323508-11324615	HUVEC	blood vessel:	n/a	n/a
15	SP1	chr12:11323502-11324520	A549	lung:	n/a	chr12:11323766-11323778 chr12:11323766-11323778 chr12:11323768-11323777
16	POLR2A	chr12:11323460-11324599	PFSK-1	brain:	n/a	n/a
17	POLR2A	chr12:11323505-11324852	GM12891	blood:	n/a	n/a
18	POLR2A	chr12:11323467-11324588	ProgFib	skin:	n/a	n/a
19	TCF12	chr12:11323491-11324616	ECC-1	luminal epithelium:	n/a	chr12:11323945-11323952
20	NFIC	chr12:11323355-11324644	GM12878	blood:	n/a	n/a
21	POLR2A	chr12:11323473-11324958	HUVEC	blood vessel:	n/a	n/a
22	GABPA	chr12:11323492-11324557	A549	lung:	n/a	chr12:11323935-11323944
23	TCF12	chr12:11323505-11324595	ECC-1	luminal epithelium:	n/a	chr12:11323945-11323952
24	POLR2A	chr12:11323344-11325080	PFSK-1	brain:	n/a	n/a
25	SIN3AK20	chr12:11323503-11324518	MCF-7	breast:	n/a	n/a
26	POLR2A	chr12:11323403-11325204	MCF10A-Er-Src	breast:	n/a	n/a
27	POLR2A	chr12:11323487-11324938	H1-hESC	embryonic stem cell:	n/a	n/a
28	POLR2A	chr12:11323416-11324767	PBDE	blood:	n/a	n/a
29	TAL1	chr12:11323280-11324338	K562	blood:	n/a	n/a
30	CEBPB	chr12:11323482-11324818	Hela-S3	cervix:	n/a	chr12:11324030-11324047 chr12:11323514-11323527
31	BCLAF1	chr12:11323449-11324512	GM12878	blood:	n/a	chr12:11324225-11324234 chr12:11323768-11323777 chr12:11324228-11324237
32	FOS	chr12:11323501-11324512	HUVEC	blood vessel:	n/a	chr12:11323934-11323943
33	POLR2A	chr12:11323513-11324594	ECC-1	luminal epithelium:	n/a	n/a
34	GATA1	chr12:11323349-11324508	PBDE	blood:	n/a	n/a
35	POLR2A	chr12:11323147-11325377	K562	blood:	n/a	n/a
36	POLR2A	chr12:11323489-11324836	MCF-7	breast:	n/a	n/a
37	POLR2A	chr12:11323440-11324617	GM12878	blood:	n/a	n/a
38	E2F4	chr12:11323468-11324670	MCF10A-Er-Src	breast:	n/a	chr12:11323816-11323826 chr12:11324186-11324196
39	POLR2A	chr12:11323359-11324717	U87	brain:	n/a	n/a
40	POLR2A	chr12:11323484-11325334	MCF10A-Er-Src	breast:	n/a	n/a
41	POLR2A	chr12:11323514-11324501	K562	blood:	n/a	n/a
42	BCL3	chr12:11323498-11324407	A549	lung:	n/a	chr12:11324225-11324234 chr12:11323768-11323777 chr12:11324228-11324237
43	TFAP2C	chr12:11323393-11324547	Hela-S3	cervix:	n/a	n/a
44	POLR2A	chr12:11323464-11324818	SK-N-SH	brain:	n/a	n/a
45	POLR2A	chr12:11323505-11324514	SK-N-MC	brain:	n/a	n/a
46	HCFC1	chr12:11323329-11325360	Hela-S3	cervix:	n/a	n/a
47	IRF1	chr12:11323346-11324725	K562	blood:	n/a	chr12:11323766-11323780 chr12:11324505-11324519 chr12:11324237-11324246 chr12:11324506-11324522
48	CREB1	chr12:11323516-11324499	HepG2	liver:	n/a	n/a
49	SIN3AK20	chr12:11323467-11324569	HCT-116	colon:	n/a	n/a
50	POLR2A	chr12:11323432-11324580	SK-N-MC	brain:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr12:11091072..11093170-chr12:11322389..11325259,3	MCF-7	breast:
2	chr12:11321289..11323850-chr12:11635988..11637922,2	MCF-7	breast:
3	chr12:10365255..10367563-chr12:11322614..11325373,2	K562	blood:
4	chr12:11307789..11310150-chr12:11322132..11323842,2	MCF-7	breast:
5	chr12:11323499..11324407-chr2:85132715..85133333,2	Hela-S3	cervix:
6	chr12:11322782..11326787-chr12:11332516..11335699,5	K562	blood:
7	chr12:11321748..11327565-chr12:11327784..11333912,14	MCF-7	breast:
8	chr12:11322432..11324431-chr12:72056353..72059109,2	MCF-7	breast:
9	chr12:10961808..10964056-chr12:11322515..11324346,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000256537	TF binding region
ENSG00000173451	Chromatin interaction
ENSG00000139112	Chromatin interaction
ENSG00000212127	Chromatin interaction
ENSG00000256629	Chromatin interaction
ENSG00000034510	Chromatin interaction
ENSG00000255958	Chromatin interaction
ENSG00000133858	Chromatin interaction
ENSG00000121381	Chromatin interaction

Extended variants
information (count: 167 )
Associated
traits (count: 11 )

rSNPs within LD-proxies of this variant (count:157)

rs_ID	r²[population]
rs1047709	0.82[ASN][1000 genomes]
rs1047712	0.80[ASN][1000 genomes]
rs11557132	0.99[AFR][1000 genomes];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1376742	0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1451765	0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs1451772	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1551191	0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1551192	0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1650020	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1650029	0.81[AFR][1000 genomes];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1650030	0.82[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs1650031	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1650053	0.86[AMR][1000 genomes];0.80[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1669410	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1669412	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1669414	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1669418	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1669422	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1817104	0.85[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs1823663	0.88[ASN][1000 genomes]
rs1823664	0.88[ASN][1000 genomes]
rs1839859	0.88[ASN][1000 genomes]
rs1863848	0.81[ASN][1000 genomes]
rs2008253	0.83[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs2019629	0.88[ASN][1000 genomes]
rs2019633	0.88[ASN][1000 genomes]
rs2123006	1.00[ASN][1000 genomes]
rs2123007	1.00[ASN][1000 genomes]
rs2167481	1.00[ASN][1000 genomes]
rs2218818	0.87[ASN][1000 genomes]
rs2416544	1.00[ASN][1000 genomes]
rs2416545	1.00[ASN][1000 genomes]
rs2416546	1.00[ASN][1000 genomes]
rs2416547	1.00[ASN][1000 genomes]
rs2416548	0.82[ASN][1000 genomes]
rs2416549	0.82[ASN][1000 genomes]
rs2559581	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2597918	0.87[ASN][1000 genomes]
rs2597919	0.88[ASN][1000 genomes]
rs2597920	0.88[ASN][1000 genomes]
rs2597921	0.88[ASN][1000 genomes]
rs2597923	0.88[ASN][1000 genomes]
rs2597930	0.81[ASN][1000 genomes]
rs2597931	0.81[ASN][1000 genomes]
rs2599396	0.88[ASN][1000 genomes]
rs2599397	0.83[ASN][1000 genomes]
rs2599398	0.83[ASN][1000 genomes]
rs2599404	0.88[ASN][1000 genomes]
rs2600350	0.87[ASN][1000 genomes]
rs2600351	0.88[ASN][1000 genomes]
rs2600352	0.88[ASN][1000 genomes]
rs2600353	0.88[ASN][1000 genomes]
rs2600354	0.88[ASN][1000 genomes]
rs2600355	0.84[ASN][1000 genomes]
rs2600357	0.88[ASN][1000 genomes]
rs2600359	0.83[ASN][1000 genomes]
rs2600361	0.82[ASN][1000 genomes]
rs2600363	0.83[ASN][1000 genomes]
rs2600364	0.82[ASN][1000 genomes]
rs2708331	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2708343	0.82[ASN][1000 genomes]
rs2708344	0.82[ASN][1000 genomes]
rs2708345	0.81[ASN][1000 genomes]
rs2708350	0.82[ASN][1000 genomes]
rs2708368	0.87[ASN][1000 genomes]
rs2708369	0.87[ASN][1000 genomes]
rs2708370	0.88[ASN][1000 genomes]
rs2923860	0.88[ASN][1000 genomes]
rs319267	0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs319268	0.83[AFR][1000 genomes];0.94[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs319271	0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs319272	0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs319273	0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs319274	0.86[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs34000114	0.87[ASN][1000 genomes]
rs34018339	1.00[ASN][1000 genomes]
rs34082341	0.87[ASN][1000 genomes]
rs34241192	0.88[ASN][1000 genomes]
rs34270405	0.95[AFR][1000 genomes];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34288418	0.88[ASN][1000 genomes]
rs34327967	0.88[ASN][1000 genomes]
rs34436598	0.87[ASN][1000 genomes]
rs34444884	0.82[ASN][1000 genomes]
rs34531956	1.00[ASN][1000 genomes]
rs34536990	0.88[ASN][1000 genomes]
rs34548551	0.88[ASN][1000 genomes]
rs34590962	0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs34685506	0.88[ASN][1000 genomes]
rs34769150	0.88[ASN][1000 genomes]
rs34843817	0.88[ASN][1000 genomes]
rs34927715	0.88[ASN][1000 genomes]
rs35017789	0.87[ASN][1000 genomes]
rs35021653	0.88[ASN][1000 genomes]
rs35119575	0.84[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs35124606	0.88[ASN][1000 genomes]
rs35151793	1.00[ASN][1000 genomes]
rs35183723	0.84[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs35267335	0.81[AFR][1000 genomes]
rs35280352	0.88[ASN][1000 genomes]
rs35326227	0.80[ASN][1000 genomes]
rs35340812	0.88[ASN][1000 genomes]
rs35699328	0.88[ASN][1000 genomes]
rs35813024	0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs35856529	0.87[ASN][1000 genomes]
rs35893804	0.88[ASN][1000 genomes]
rs36050405	0.88[AFR][1000 genomes];0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs36062343	0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs36115011	0.88[ASN][1000 genomes]
rs3906996	0.88[ASN][1000 genomes]
rs3911800	0.95[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4583064	0.82[ASN][1000 genomes]
rs4763638	0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs61928449	0.86[ASN][1000 genomes]
rs61928562	0.87[ASN][1000 genomes]
rs61928564	0.87[ASN][1000 genomes]
rs61928565	0.87[ASN][1000 genomes]
rs61928566	0.87[ASN][1000 genomes]
rs61928569	0.88[ASN][1000 genomes]
rs61928595	0.83[AFR][1000 genomes];0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs61928597	0.88[ASN][1000 genomes]
rs61928602	0.88[ASN][1000 genomes]
rs61928610	0.88[AFR][1000 genomes];0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs61928618	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61928619	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61928643	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61928644	0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.80[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs61928646	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs61931266	0.83[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs61931270	0.88[ASN][1000 genomes]
rs61931274	0.83[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs61931278	0.85[ASN][1000 genomes]
rs61931279	0.87[ASN][1000 genomes]
rs6488347	0.89[ASN][1000 genomes]
rs6488348	0.89[ASN][1000 genomes]
rs6488349	0.89[ASN][1000 genomes]
rs6488350	0.89[ASN][1000 genomes]
rs6488351	0.88[ASN][1000 genomes]
rs6488355	0.88[ASN][1000 genomes]
rs6488356	0.88[ASN][1000 genomes]
rs7298544	0.87[ASN][1000 genomes]
rs7302010	0.88[ASN][1000 genomes]
rs7310047	0.88[ASN][1000 genomes]
rs7313796	0.81[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs7350611	0.81[ASN][1000 genomes]
rs7486717	0.88[ASN][1000 genomes]
rs7488095	0.82[ASN][1000 genomes]
rs7488102	0.80[ASN][1000 genomes]
rs7955495	0.88[ASN][1000 genomes]
rs7959320	0.88[ASN][1000 genomes]
rs7960823	0.88[ASN][1000 genomes]
rs7965506	0.88[ASN][1000 genomes]
rs7969625	1.00[ASN][1000 genomes]
rs7970225	0.86[ASN][1000 genomes]
rs7973730	0.88[ASN][1000 genomes]
rs7976211	0.88[ASN][1000 genomes]
rs8300	0.95[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs977473	0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:10 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2758294	chr12:10969620-11714921	Weak transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Strong transcription Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	52 gene(s)	inside rSNPs	diseases
2	esv2759879	chr12:10969620-11714921	Genic enhancers Enhancers Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	52 gene(s)	inside rSNPs	diseases
3	nsv1038277	chr12:11060978-11504091	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	40 gene(s)	inside rSNPs	diseases
4	nsv428272	chr12:11069845-11714921	Enhancers ZNF genes & repeats Weak transcription Strong transcription Active TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	47 gene(s)	inside rSNPs	diseases
5	nsv898783	chr12:11185236-11338781	ZNF genes & repeats Genic enhancers Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
6	nsv898784	chr12:11188140-11341521	Active TSS ZNF genes & repeats Enhancers Weak transcription Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
7	nsv1050050	chr12:11192046-11436359	Weak transcription Enhancers ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
8	nsv1053783	chr12:11203509-11495584	Weak transcription ZNF genes & repeats Genic enhancers Enhancers Strong transcription Bivalent Enhancer Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	32 gene(s)	inside rSNPs	diseases
9	esv1807067	chr12:11214215-11568895	Flanking Active TSS Weak transcription Genic enhancers Enhancers ZNF genes & repeats Strong transcription Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
10	nsv1042134	chr12:11220712-11328131	Enhancers Strong transcription ZNF genes & repeats Weak transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases

mRNA abundance (count:11)

SNP	Gene	Cis/trans	Tissue	Source
rs61928642	PRR4	cis	Artery Tibial	GTEx
rs61928642	TAS2R14	cis	Nerve Tibial	GTEx
rs61928642	PRR4	cis	Thyroid	GTEx
rs61928642	PRR4	cis	Muscle Skeletal	GTEx
rs61928642	PRR4	cis	Nerve Tibial	GTEx
rs61928642	RP11-434C1.1	cis	Nerve Tibial	GTEx
rs61928642	RP11-434C1.1	cis	Heart Left Ventricle	GTEx
rs61928642	RP11-434C1.1	cis	lung	GTEx
rs61928642	PRR4	cis	Whole Blood	GTEx
rs61928642	PRR4	cis	lung	GTEx
rs61928642	PRR4	cis	Heart Left Ventricle	GTEx

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:11303800-11323600	Weak transcription	Esophagus	oesophagus
2	chr12:11304000-11323600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr12:11313800-11323600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr12:11319200-11323600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr12:11319200-11323600	Weak transcription	Lung	lung
6	chr12:11319600-11323600	Weak transcription	Ovary	ovary
7	chr12:11319600-11323800	Weak transcription	Spleen	Spleen
8	chr12:11321200-11323600	Enhancers	Sigmoid Colon	Sigmoid Colon
9	chr12:11321600-11323600	Enhancers	Small Intestine	intestine
10	chr12:11321800-11323800	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
11	chr12:11322200-11326000	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
12	chr12:11322400-11324800	Active TSS	Brain Inferior Temporal Lobe	brain
13	chr12:11322400-11325800	Active TSS	K562	blood
14	chr12:11322600-11325600	Active TSS	HSMMtube	muscle
15	chr12:11322800-11323600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
16	chr12:11322800-11325000	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
17	chr12:11322800-11325200	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
18	chr12:11322800-11325200	Active TSS	Stomach Smooth Muscle	stomach
19	chr12:11322800-11325400	Active TSS	HUES64 Cell Line	embryonic stem cell
20	chr12:11322800-11325400	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
21	chr12:11322800-11325400	Active TSS	A549	lung
22	chr12:11322800-11325600	Active TSS	ES-I3 Cell Line	embryonic stem cell
23	chr12:11322800-11325600	Active TSS	iPS-20b Cell Line	embryonic stem cell
24	chr12:11322800-11325800	Active TSS	GM12878-XiMat	blood
25	chr12:11322800-11326200	Active TSS	HUES6 Cell Line	embryonic stem cell
26	chr12:11323000-11323600	Flanking Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
27	chr12:11323000-11323600	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
28	chr12:11323000-11323600	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
29	chr12:11323000-11323600	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
30	chr12:11323000-11323600	Flanking Active TSS	Duodenum Mucosa	Duodenum
31	chr12:11323000-11323600	Weak transcription	Gastric	stomach
32	chr12:11323000-11323600	Flanking Active TSS	Hela-S3	cervix
33	chr12:11323000-11323800	Flanking Active TSS	Primary T cells from cord blood	blood
34	chr12:11323000-11323800	Flanking Active TSS	HUVEC	blood vessel
35	chr12:11323000-11325400	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
36	chr12:11323000-11325400	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
37	chr12:11323000-11325600	Active TSS	NHLF	lung
38	chr12:11323200-11323600	Enhancers	Primary neutrophils fromperipheralblood	blood
39	chr12:11323200-11323600	Flanking Active TSS	Primary T helper memory cells from peripheral blood 2	blood
40	chr12:11323200-11323600	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
41	chr12:11323200-11323600	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
42	chr12:11323200-11323600	Flanking Active TSS	Adipose Nuclei	Adipose
43	chr12:11323200-11323600	Flanking Active TSS	Fetal Brain Male	brain
44	chr12:11323200-11323600	Flanking Active TSS	Fetal Brain Female	brain
45	chr12:11323200-11323600	Flanking Active TSS	Fetal Heart	heart
46	chr12:11323200-11323600	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
47	chr12:11323200-11323600	Flanking Active TSS	Rectal Smooth Muscle	rectum
48	chr12:11323200-11323600	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
49	chr12:11323200-11323600	Flanking Active TSS	NH-A	brain
50	chr12:11323200-11323600	Flanking Active TSS	Osteobl	bone

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