The 2.0 version of rSNPBase

Variant report

Variant rs61928644
Chromosome Location chr12:11326842-11326843
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:11325000-11335600 Weak transcription Left Ventricle heart
2 chr12:11325200-11327000 Enhancers Brain Substantia Nigra brain
3 chr12:11325200-11327800 Weak transcription Stomach Smooth Muscle stomach
4 chr12:11325200-11328400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr12:11325200-11328600 Weak transcription Thymus Thymus
6 chr12:11325200-11330000 Weak transcription Primary T cells fromperipheralblood blood
7 chr12:11325200-11330400 Weak transcription Skeletal Muscle Female skeletal muscle
8 chr12:11325200-11332200 Weak transcription Fetal Muscle Leg muscle
9 chr12:11325200-11332200 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr12:11325400-11331400 Weak transcription Psoas Muscle Psoas
11 chr12:11325400-11331800 Weak transcription Monocytes-CD14+_RO01746 blood
12 chr12:11325400-11332000 Weak transcription Primary T regulatory cells fromperipheralblood blood
13 chr12:11325600-11327000 Enhancers Brain Angular Gyrus brain
14 chr12:11325600-11327000 Enhancers Rectal Smooth Muscle rectum
15 chr12:11325600-11327600 Enhancers Pancreatic Islets Pancreatic Islet
16 chr12:11325600-11328800 Weak transcription Fetal Intestine Large intestine
17 chr12:11325600-11329000 Weak transcription Primary monocytes fromperipheralblood blood
18 chr12:11325600-11330000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
19 chr12:11325600-11331400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
20 chr12:11325600-11332200 Weak transcription Brain Germinal Matrix brain
21 chr12:11325600-11334400 Weak transcription Primary B cells from cord blood blood
22 chr12:11325600-11338200 Weak transcription Primary B cells from peripheral blood blood
23 chr12:11325800-11328000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
24 chr12:11325800-11329000 Strong transcription Primary hematopoietic stem cells short term culture blood
25 chr12:11325800-11329600 Weak transcription ES-I3 Cell Line embryonic stem cell
26 chr12:11326000-11327000 Strong transcription Primary T cells from cord blood blood
27 chr12:11326000-11328000 Weak transcription Primary hematopoietic stem cells blood
28 chr12:11326000-11328400 Weak transcription Hela-S3 cervix
29 chr12:11326000-11328800 Weak transcription Muscle Satellite Cultured Cells --
30 chr12:11326000-11329000 Weak transcription Duodenum Smooth Muscle Duodenum
31 chr12:11326000-11330000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr12:11326000-11330400 Weak transcription Primary T helper naive cells from peripheral blood blood
33 chr12:11326000-11330400 Weak transcription Fetal Lung lung
34 chr12:11326000-11330800 Weak transcription HUVEC blood vessel
35 chr12:11326000-11331000 Weak transcription Primary T helper naive cells fromperipheralblood blood
36 chr12:11326000-11331800 Weak transcription Primary T killer naive cells fromperipheralblood blood
37 chr12:11326000-11334400 Weak transcription Cortex derived primary cultured neurospheres brain
38 chr12:11326200-11327000 Genic enhancers Dnd41 blood
39 chr12:11326200-11327800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
40 chr12:11326200-11328000 Weak transcription iPS-20b Cell Line embryonic stem cell
41 chr12:11326200-11328800 Weak transcription Ovary ovary
42 chr12:11326200-11329200 Weak transcription Fetal Brain Female brain
43 chr12:11326200-11331400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
44 chr12:11326200-11331400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr12:11326200-11331600 Weak transcription HMEC breast
46 chr12:11326200-11331800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
47 chr12:11326200-11334600 Weak transcription Liver Liver
48 chr12:11326200-11338600 Weak transcription Fetal Adrenal Gland Adrenal Gland
49 chr12:11326400-11327200 Genic enhancers K562 blood
50 chr12:11326400-11327400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

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Last update: Aug 31, 2015