The 2.0 version of rSNPBase

Variant report

Variant rs61975193
Chromosome Location chr13:96400057-96400058
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:96366400-96415800 Weak transcription HSMMtube muscle
2 chr13:96367600-96436000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr13:96367800-96430200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
4 chr13:96386800-96415200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr13:96386800-96415600 Weak transcription Primary hematopoietic stem cells blood
6 chr13:96387000-96403400 Weak transcription Primary B cells from cord blood blood
7 chr13:96387000-96409600 Weak transcription Liver Liver
8 chr13:96387000-96412000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr13:96387000-96412800 Weak transcription Dnd41 blood
10 chr13:96387000-96415400 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr13:96387000-96428800 Weak transcription Primary T killer memory cells from peripheral blood blood
12 chr13:96392800-96413000 Weak transcription Fetal Muscle Leg muscle
13 chr13:96393600-96404800 Weak transcription Fetal Heart heart
14 chr13:96393800-96409800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
15 chr13:96393800-96412800 Weak transcription Muscle Satellite Cultured Cells --
16 chr13:96393800-96415800 Weak transcription Osteobl bone
17 chr13:96394000-96412400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr13:96394000-96415200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
19 chr13:96394000-96435800 Weak transcription A549 lung
20 chr13:96394400-96438400 Weak transcription Primary T killer naive cells fromperipheralblood blood
21 chr13:96394600-96412200 Weak transcription Primary T regulatory cells fromperipheralblood blood
22 chr13:96394600-96413600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
23 chr13:96394600-96413800 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr13:96394600-96435800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr13:96394800-96401600 Weak transcription Skeletal Muscle Male skeletal muscle
26 chr13:96394800-96401600 Weak transcription Skeletal Muscle Female skeletal muscle
27 chr13:96394800-96406200 Weak transcription Primary hematopoietic stem cells short term culture blood
28 chr13:96394800-96409600 Weak transcription Duodenum Mucosa Duodenum
29 chr13:96394800-96412800 Weak transcription Primary T cells fromperipheralblood blood
30 chr13:96394800-96412800 Weak transcription Primary T helper cells PMA-I stimulated --
31 chr13:96394800-96414800 Weak transcription Primary B cells from peripheral blood blood
32 chr13:96394800-96420600 Weak transcription Esophagus oesophagus
33 chr13:96395000-96409600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
34 chr13:96395200-96414000 Weak transcription Fetal Stomach stomach
35 chr13:96395400-96413000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr13:96395800-96408200 Weak transcription Primary T cells from cord blood blood
37 chr13:96396000-96401800 Weak transcription Gastric stomach
38 chr13:96396000-96411600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
39 chr13:96396000-96412200 Weak transcription Rectal Mucosa Donor 29 rectum
40 chr13:96396000-96414000 Weak transcription Lung lung
41 chr13:96396200-96406200 Weak transcription Right Atrium heart
42 chr13:96396400-96405000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr13:96397600-96400200 Enhancers Fetal Intestine Large intestine
44 chr13:96397800-96400600 Enhancers Pancreatic Islets Pancreatic Islet
45 chr13:96398000-96406200 Weak transcription Breast Myoepithelial Primary Cells Breast
46 chr13:96398000-96409600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr13:96398200-96412400 Weak transcription HSMM muscle
48 chr13:96398200-96424400 Weak transcription NHDF-Ad bronchial
49 chr13:96398400-96404200 Weak transcription Right Ventricle heart
50 chr13:96398400-96404200 Weak transcription GM12878-XiMat blood

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Last update: Aug 31, 2015