Variant report

No.	Distal block	Cell Line	Cell type
1	chr14:70132759..70134809-chr14:70205522..70208289,2	MCF-7	breast:
2	chr14:70206029..70208107-chr14:70210614..70212846,2	MCF-7	breast:
3	chr14:70201940..70209552-chr14:70230630..70235494,20	MCF-7	breast:
4	chr14:70204069..70207005-chr14:70232865..70236046,4	K562	blood:
5	chr14:70202452..70213184-chr14:70231962..70238183,25	MCF-7	breast:
6	chr14:70206409..70208457-chr14:70238342..70240057,3	MCF-7	breast:
7	chr14:70200097..70202491-chr14:70206631..70210383,3	K562	blood:

Variant related genes	Relation type
ENSG00000100650	Chromatin interaction

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs11623504	1.00[AFR][1000 genomes]
rs11626135	1.00[AFR][1000 genomes]
rs11626930	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs11628140	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11628755	1.00[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs12434311	1.00[AFR][1000 genomes]
rs12434937	0.83[AMR][1000 genomes]
rs2877596	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs4340264	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes];0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4341691	1.00[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs45527638	1.00[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs56063215	1.00[AFR][1000 genomes]
rs56154784	1.00[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs61982074	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61982101	1.00[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs61982104	1.00[AFR][1000 genomes]
rs61982105	1.00[AFR][1000 genomes]
rs61982106	1.00[AFR][1000 genomes]
rs61982107	1.00[AFR][1000 genomes]
rs72725721	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs72725750	1.00[AFR][1000 genomes]
rs8013586	1.00[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs8014462	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8019166	1.00[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs943276	1.00[AFR][1000 genomes]
rs943277	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv456336	chr14:70081956-70574149	Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	75 gene(s)	inside rSNPs	diseases
2	nsv565007	chr14:70081956-70574149	Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	75 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:70198400-70207400	Weak transcription	Liver	Liver
2	chr14:70200200-70207200	Weak transcription	HepG2	liver
3	chr14:70205400-70207200	Enhancers	Placenta	Placenta
4	chr14:70206000-70207000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr14:70206000-70208600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr14:70206400-70207000	Enhancers	H1 Cell Line	embryonic stem cell
7	chr14:70206400-70207000	Enhancers	Placenta Amnion	Placenta Amnion
8	chr14:70206400-70208200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
9	chr14:70206400-70208200	Enhancers	HMEC	breast
10	chr14:70206600-70207400	Enhancers	iPS-18 Cell Line	embryonic stem cell
11	chr14:70206800-70207200	Weak transcription	NHEK	skin
12	chr14:70206800-70207600	Weak transcription	Stomach Mucosa	stomach

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