Variant report

Variant	rs61982405
Chromosome Location	chr14:69930952-69930953
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs7151003	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3396933	chr14:69906914-70001258	Enhancers Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription Strong transcription Bivalent Enhancer Active TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
2	nsv1048882	chr14:69920881-69976694	Enhancers Weak transcription Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
3	nsv1052107	chr14:69922552-69969297	Enhancers Weak transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
4	nsv1039230	chr14:69922552-69972002	Strong transcription Enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
5	nsv1039192	chr14:69922552-69976694	Bivalent Enhancer Weak transcription Strong transcription Bivalent/Poised TSS Enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
6	nsv456335	chr14:69928307-69971598	Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Bivalent/Poised TSS Strong transcription Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
7	nsv564967	chr14:69928307-69971598	Flanking Bivalent TSS/Enh Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:81 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69892200-69931400	Weak transcription	K562	blood
2	chr14:69903600-69937800	Weak transcription	Psoas Muscle	Psoas
3	chr14:69909000-69933200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
4	chr14:69915800-69932600	Weak transcription	Fetal Heart	heart
5	chr14:69922200-69931600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
6	chr14:69923400-69931000	Weak transcription	Stomach Mucosa	stomach
7	chr14:69923600-69950400	Weak transcription	Gastric	stomach
8	chr14:69923800-69931200	Weak transcription	NHDF-Ad	bronchial
9	chr14:69924200-69931400	Weak transcription	Small Intestine	intestine
10	chr14:69925400-69931200	Weak transcription	Lung	lung
11	chr14:69925400-69931400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
12	chr14:69925400-69939600	Weak transcription	Pancreas	Pancrea
13	chr14:69925400-69942000	Weak transcription	Spleen	Spleen
14	chr14:69925600-69940000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
15	chr14:69925600-69940000	Weak transcription	Hela-S3	cervix
16	chr14:69926000-69931400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
17	chr14:69926000-69933000	Weak transcription	A549	lung
18	chr14:69926000-69933200	Weak transcription	Brain Inferior Temporal Lobe	brain
19	chr14:69926000-69940000	Weak transcription	Brain Anterior Caudate	brain
20	chr14:69926000-69940000	Weak transcription	Fetal Intestine Small	intestine
21	chr14:69926200-69931000	Weak transcription	Brain Hippocampus Middle	brain
22	chr14:69926200-69931200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
23	chr14:69926200-69935200	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
24	chr14:69926200-69937200	Weak transcription	Left Ventricle	heart
25	chr14:69927800-69939400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
26	chr14:69928000-69932600	Weak transcription	Fetal Stomach	stomach
27	chr14:69928000-69933600	Weak transcription	Rectal Smooth Muscle	rectum
28	chr14:69928000-69941000	Weak transcription	Stomach Smooth Muscle	stomach
29	chr14:69928200-69931000	Weak transcription	Fetal Kidney	kidney
30	chr14:69928400-69934400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
31	chr14:69928600-69931000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
32	chr14:69928600-69932800	Weak transcription	GM12878-XiMat	blood
33	chr14:69928600-69935000	Weak transcription	Primary neutrophils fromperipheralblood	blood
34	chr14:69928600-69950600	Weak transcription	Aorta	Aorta
35	chr14:69928800-69931400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
36	chr14:69928800-69933400	Weak transcription	Fetal Thymus	thymus
37	chr14:69928800-69940200	Weak transcription	Thymus	Thymus
38	chr14:69928800-69940400	Weak transcription	Adipose Nuclei	Adipose
39	chr14:69928800-69941000	Weak transcription	Sigmoid Colon	Sigmoid Colon
40	chr14:69929000-69931200	Weak transcription	Primary B cells from peripheral blood	blood
41	chr14:69929000-69931200	Weak transcription	Muscle Satellite Cultured Cells	--
42	chr14:69929000-69933200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
43	chr14:69929000-69933200	Weak transcription	Dnd41	blood
44	chr14:69929000-69933400	Weak transcription	Primary B cells from cord blood	blood
45	chr14:69929000-69934000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
46	chr14:69929000-69934200	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
47	chr14:69929000-69935200	Weak transcription	Primary monocytes fromperipheralblood	blood
48	chr14:69929000-69935800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
49	chr14:69929000-69938800	Weak transcription	Primary T cells fromperipheralblood	blood
50	chr14:69929000-69940200	Weak transcription	HSMMtube	muscle

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