Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:69979995..69982443-chr14:69986701..69988588,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs17764280	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs17836244	0.88[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs1957369	0.97[AMR][1000 genomes];0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4899303	0.82[ASN][1000 genomes]
rs4899304	0.82[ASN][1000 genomes]
rs4902728	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs55727771	0.97[AMR][1000 genomes];0.87[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs55817110	0.88[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs55923041	0.97[AMR][1000 genomes];0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs56249045	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs56791796	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs57723763	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs60974342	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs61980683	0.83[AMR][1000 genomes]
rs61980684	0.97[AMR][1000 genomes];0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs61980693	0.88[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs61980724	0.86[AMR][1000 genomes]
rs61982429	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs61982435	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs61982440	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7141009	0.83[AMR][1000 genomes]
rs7151003	0.82[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3396933	chr14:69906914-70001258	Enhancers Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription Strong transcription Bivalent Enhancer Active TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
2	nsv510642	chr14:69983293-70030335	Enhancers Bivalent Enhancer Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69986800-69987600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr14:69986800-69988000	Weak transcription	Breast Myoepithelial Primary Cells	Breast

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